Entering edit mode
16 months ago
shlo12
▴
20
Hi I have generated .narrowPeak files using genrich and normalised .bw files using bamCoverage. I have 3 donors and treated and control samples for both B cells & T cells. This is what my samples.csv file looks like: (note, it contains both b & t and .narrowPeak for each replicate) SampleID,Condition,CellType,Donor,PeakFile,BigWigFile
when I use the following code : diff_bind_obj <- dba(sampleSheet = sample_sheet, peakFormat = "narrow", minOverlap = 2)
i get this when i print the diff_bind_obj
Kindly help! It would be greatly appreciated
