User: zorbax

gravatar for zorbax
zorbax30
Reputation:
30
Status:
New User
Location:
Mexico
Last seen:
10 months, 3 weeks ago
Joined:
5 years, 5 months ago
Email:
o*****@gmail.com

Posts by zorbax

<prev • 8 results • page 1 of 1 • next >
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Answer: A: Fastx toolkits: fastq_quality_filter does not discart any read
... Is just -Q33 without space. ...
written 3.9 years ago by zorbax30
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Answer: A: warning in rstudio
... It's an issue with the directory in which you store you packages, I have come across this 3 solutions if your problem don't solve re-installing "seqinr": 1.  Delete your .Rhistory and .RData files in the directory in which you are running R. 2.  Try to run an "update.packages()" 3.  If those fail, ...
written 4.2 years ago by zorbax30
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Answer: A: extract predicted gene sequences from gilmmer output
... You can use http://dawgpaws.sourceforge.net/man/cnv_genemark2gff.html (this is for GeneMark) For glimmer: grep ^orf output.glimmer | awk '{OFS="\t"}{strang = "+"}{if($4 < 0) strang="-"}{gsub(/[+-]/," ")}{print "FASTA_HEADER", "GLIMMER", "gene" , $2 , $3, $5, strang , $4, "ID="$1"; NOTE:GLIMMER ...
written 4.2 years ago by zorbax30
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Answer: A: Counting Features metaRNA-seq
... Have you tried this? -_- ...
written 5.0 years ago by zorbax30
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Answer: A: RNA probe ids from affymetrix
... cat file_table | awk '{print $1}' | perl -pe 's/\"//g; s/\_at//; s/^\s+//g' | tail -n +2 > ids   Then upload the file here and download the info.   ...
written 5.0 years ago by zorbax30
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Answer: A: Identical structure in different domains.
... Hi: ITASSER could help you. It's a "server for protein 3D structure prediction". This server also predicts binding sites. About the superimpose, well, PyMOL can be helpful with 'align' option in terminal: 'align struc1, struct2'... ...
written 5.0 years ago by zorbax30
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Answer: A: Oncogene database
... You already check this > http://www.binfo.ncku.edu.tw/TAG/GeneFinder_chr.php ...
written 5.0 years ago by zorbax30
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Answer: A: What each column from Genotyping data is? (GWAS)
... Hi: It looks like a configuration file for later analysis. Btw, you provide few data. this help you? https://www.biostars.org/p/16982/   ...
written 5.0 years ago by zorbax30

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