User: mahnazkiani

gravatar for mahnazkiani
mahnazkiani50
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United States
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4 weeks, 1 day ago
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Posts by mahnazkiani

<prev • 37 results • page 1 of 4 • next >
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Comment: C: Why AMOVA test is not active in Arlequin?
... Thank you, this problem is solved but I am getting the following error while running AMOVA. This error has been shown for all locus! Locus by locus AMOVA: ******************** Distance method for locus-by-locus analysis: Pairwise difference #[WARNING # 1] : A population does not contain any data ...
written 12 weeks ago by mahnazkiani50
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Why AMOVA test is not active in Arlequin?
... I entered the data to Arlequin and under Genetic structure, the AMOVA option is not active, is this related to input data? The other options are active and will run the analysis. Thanks, ...
snp written 3 months ago by mahnazkiani50 • updated 11 weeks ago by Biostar ♦♦ 20
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Comment: C: SNP input data for Arlequin
... I tried to use DnaSP as well but when I convert my data to .NEXUS by PGDSpider it is not readable in DnaSp ...
written 3 months ago by mahnazkiani50
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SNP input data for Arlequin
... I got the population.haps.vcf file from Stacks and converted to .arp file using PGDSpider, but still is not working in Arlequin. I appreciate your help for preparing Arlequin input file. I have 48 samples from 8 populations. Do I need to edit the file? Thanks!`` ...
ddrad written 3 months ago by mahnazkiani50
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Comment: C: WGCNA soft-threshold power selection
... I am using log2(x+1) normalized total counts RNa-seq data. ...
written 4 months ago by mahnazkiani50
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Comment: C: WGCNA module-trait relationship
... Data that we have are from separated experiments, therefore for some of the samples we do have expression data, but no trait data ...
written 4 months ago by mahnazkiani50
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Comment: C: WGCNA module-trait relationship
... I mean that do we need to have trait data for all samples that we have RNA-seq data for? ...
written 4 months ago by mahnazkiani50
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WGCNA module-trait relationship
... Hi, Do we need to have identical samples for recorded traits and expresseion data in order to calculate the correlation between traits and modules? Thanks! ...
rna-seq written 4 months ago by mahnazkiani50
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Comment: C: WGCNA soft-threshold power selection
... Thank you for sharing the link ...
written 4 months ago by mahnazkiani50
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Comment: C: WGCNA soft-threshold power selection
written 4 months ago by mahnazkiani50 • updated 4 months ago by genomax74k

Latest awards to mahnazkiani

Popular Question 3 months ago, created a question with more than 1,000 views. For Network analysis-next step after calculating correlation in R
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Student 2.0 years ago, asked a question with at least 3 up-votes. For Network analysis software
Popular Question 2.1 years ago, created a question with more than 1,000 views. For Network analysis-next step after calculating correlation in R
Popular Question 3.1 years ago, created a question with more than 1,000 views. For Network analysis-next step after calculating correlation in R
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Popular Question 3.1 years ago, created a question with more than 1,000 views. For Network analysis software
Popular Question 4.2 years ago, created a question with more than 1,000 views. For Network analysis software

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