User: midox

gravatar for midox
midox180
Reputation:
180
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Trusted
Location:
Tunisia
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4 months, 2 weeks ago
Joined:
3 years, 4 months ago
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m***********@gmail.com

Posts by midox

<prev • 264 results • page 1 of 27 • next >
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Comment: C: Reads length Distribution of ONT reads and Error rate
... oups sorry. To Brian. and everyone ...
written 4 months ago by midox180
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Comment: C: Reads length Distribution of ONT reads and Error rate
... Please brian. When I do mapping sequences on the reference genomes using BBmap I consider the overall mapping rate in "**pct bases**" ?? Thanks ...
written 4 months ago by midox180
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Comment: C: Reads length Distribution of ONT reads and Error rate
... I am looking for a distribution that already exists of number of nanopore reads according to their lengths and the different error rates. If I can do it with BBmap I try to map the raw reads on the reference genome and extract this informations. ...
written 4 months ago by midox180
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Comment: C: Reads length Distribution of ONT reads and Error rate
... in the case of PacBio reads or i can also use Nanopore? ...
written 4 months ago by midox180
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Reads length Distribution of ONT reads and Error rate
... Hello, I want to know the distribution of the reads and the error rate (mismatch, insertion, deletion) of the Nanopore Sequencing Technology. Thank you ...
reads distribution ngs error rate nanopore written 4 months ago by midox180 • updated 4 months ago by WouterDeCoster21k
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Comment: C: Mapping Reads to Reference Genome (Statistics)
... PacBio and Nanopore Reads. ...
written 5 months ago by midox180
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Comment: C: Mapping Reads to Reference Genome (Statistics)
... i want for DNA but tophat2 and Stringtie are for RNA! ...
written 5 months ago by midox180
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Comment: C: Mapping Reads to Reference Genome (Statistics)
... I tried with **Blasr** but it gives me a rate file of the mapping of each sequence that's why I want a tool that gives me general statistics of all sequences file. I will try them thank you. ...
written 5 months ago by midox180
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Mapping Reads to Reference Genome (Statistics)
... Hello, I try to know the rate of mapping, overall error rate... of my sequences so I wanted to know a good mapping tool that gives me general statistics of mapping of my sequences. Do you have any suggestions? Thank you ...
ngs alignment error rate mapping mapping tools written 5 months ago by midox180 • updated 5 months ago by EVR430
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Comment: C: PacBioToCA problem in correction
... have you any response to this? please ...
written 5 months ago by midox180

Latest awards to midox

Popular Question 6 months ago, created a question with more than 1,000 views. For E. coli K12 MG1655 datasets from Illumina
Popular Question 6 months ago, created a question with more than 1,000 views. For NaS (Nanopore Synthetic-long) help
Popular Question 7 months ago, created a question with more than 1,000 views. For E. coli K12 MG1655 datasets from Illumina
Popular Question 7 months ago, created a question with more than 1,000 views. For E. coli K12 MG1655 datasets from Illumina
Popular Question 8 months ago, created a question with more than 1,000 views. For E. coli K12 MG1655 datasets from Illumina
Popular Question 12 months ago, created a question with more than 1,000 views. For CAP3: A DNA Sequence Assembly Program
Popular Question 12 months ago, created a question with more than 1,000 views. For CAP3: A DNA Sequence Assembly Program
Popular Question 14 months ago, created a question with more than 1,000 views. For CAP3: A DNA Sequence Assembly Program
Popular Question 14 months ago, created a question with more than 1,000 views. For PacBio Technology Assemblers
Popular Question 14 months ago, created a question with more than 1,000 views. For Long reads Assembly Algorithms
Popular Question 16 months ago, created a question with more than 1,000 views. For CAP3: A DNA Sequence Assembly Program
Popular Question 16 months ago, created a question with more than 1,000 views. For CAP3: A DNA Sequence Assembly Program
Popular Question 19 months ago, created a question with more than 1,000 views. For CAP3: A DNA Sequence Assembly Program
Popular Question 20 months ago, created a question with more than 1,000 views. For Long reads Assembly Algorithms
Popular Question 20 months ago, created a question with more than 1,000 views. For Long reads Assembly Algorithms
Centurion 23 months ago, created 100 posts.
Supporter 2.3 years ago, voted at least 25 times.
Teacher 2.6 years ago, created an answer with at least 3 up-votes. For A: What tools you use or kow for PacBio Long Read error correction?

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