User: lakshmi.bioinformatics
- Reputation:
- 20
- Status:
- New User
- Location:
- India
- Last seen:
- 1 year, 2 months ago
- Joined:
- 4 years, 7 months ago
- Email:
- l*********************@gmail.com
Posts by lakshmi.bioinformatics
<prev
• 23 results •
page 1 of 3 •
next >
0
votes
3
answers
7.6k
views
3
answers
... @Emily can you pls suggest if the two or more ensembl ids (ultimately also their sequences ) can be used interchangably
Thanks in advance for the reply ...
written 18 months ago by
lakshmi.bioinformatics • 20
0
votes
2
answers
555
views
2
answers
... Thank you @Jean-Karim Heriche
My data is from online databases and its not an experimental one thanks again for the information.
How to extract only the human Ids from Negatome ...
written 20 months ago by
lakshmi.bioinformatics • 20
2
votes
2
answers
555
views
2
answers
... I am working on human protein protein interaction I need to run SVM I need a negative data set comprising of non interacting protein pairs how to generate these.
I found this database Negatome (http://mips.helmholtz-muenchen.de/proj/ppi/negatome/) but the the problem is it talking about most mamma ...
written 20 months ago by
lakshmi.bioinformatics • 20
0
votes
0
answers
533
views
0
answers
... thank you @ cpad0112 ...
written 20 months ago by
lakshmi.bioinformatics • 20
0
votes
0
answers
533
views
0
answers
... Thank you for pointing it out @h.mon I shall avoid these kind of statements in future ...
written 20 months ago by
lakshmi.bioinformatics • 20
0
votes
0
answers
533
views
0
answers
... sorry @h.mon I was not trying to be rude since I was asked to explain my question I was doing it since I guessed the term N is well known I mentioned it in this fashion.
Sorry if I ment to be hurting someone ...
written 20 months ago by
lakshmi.bioinformatics • 20
0
votes
0
answers
482
views
0
answers
... Yes the sequence is in fasta format and how to mask with biopython also I need to draw a CGR how can it be done with biopython ...
written 20 months ago by
lakshmi.bioinformatics • 20
0
votes
0
answers
533
views
0
answers
... I need to prepare a chaos game representation(CGR) model for around 30k gene sequences in the gene sequences there are lot of places marked with Ns(hope you know what are Ns) this is the work my doubt is can I prepare CGR using Biopython if yes how to deal with the Ns in the sequences ...
written 20 months ago by
lakshmi.bioinformatics • 20
1
vote
0
answers
533
views
0
answers
... I have a bunch of gene sequences for which I need to draw the chaos game representation model how can I do this using Biopython also I have Ns in the sequence how to mask them ...
written 20 months ago by
lakshmi.bioinformatics • 20
0
votes
0
answers
482
views
0
answers
... How to mask using Python program ...
written 20 months ago by
lakshmi.bioinformatics • 20
Latest awards to lakshmi.bioinformatics
Popular Question
3.5 years ago,
created a question with more than 1,000 views.
For Can I align the transcriptome data against the genome of closely related organism
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 652 users visited in the last hour