User: Moses M. Feaster

Reputation:
30
Status:
New User
Location:
United States
Scholar ID:
Google Scholar Page
Last seen:
3 years, 10 months ago
Joined:
3 years, 11 months ago
Email:
m*******@omicia.com

Former pluripotent stem cell and comparative developmental biologist turned personalized genomics advocate.

I'm posting on behalf of Omicia, Inc., a genome interpretation company that provides software and services to advance personalized medicine.  

We provide the following variant annotation and prioritization tools:

Omicia Opal Research

VAAST2 and pVAAST

Phevor

Please feel free to reach out to me if you have any questions about our software!

Posts by Moses M. Feaster

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Phevor: Phenotype Driven Variant Ontological Re-Ranking Tool
... Hi Karl, sorry for the late response... is it rude to run a dozen(1,000) scans? Because this is a first version of the interface for this algorithm, each run is entered manually. So the VCF is like a fingerprint, theoretically identifiable and HIPAA not allowed offsite. The current Phevor web pr ...
written 3.9 years ago by Moses M. Feaster30
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Comment: C: Phevor: Phenotype Driven Variant Ontological Re-Ranking Tool
... Hi Karl, Phevor is a proprietary web-based program, so the code isn’t available.  We co-developed Phevor with the University of Utah, and we’re currently deciding how we can integrate it into our toolset. We’re finalizing our licensing for Phevor, but we do provide academic licenses for the stand-a ...
written 4.0 years ago by Moses M. Feaster30
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Comment: C: Omicia Opal™ Research - Variant Annotation and Disease-Gene Prioritization
... Hi Dan, The free version gives researchers access to the Opal genome browser and variant annotation.  Users can upload full genomes or exomes, and get: •   sequence quality assessment with the Omicia Clinical Score •   automated annotation from 40 databases (including phyloP, CADD, SIFT, MutationT ...
written 4.0 years ago by Moses M. Feaster30
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Comment: C: Omicia Opal™ Research - Variant Annotation and Disease-Gene Prioritization
... Thanks Zev!   Have you used Opal yourself? We’d love your feedback on the UI, the utility of the annotation pipeline, VAAST integration, etc.  It may help you “suffer through your annotation-based projects” a bit less! I know you’re an user of the stand-alone command line VAAST tool, and we think ...
written 4.0 years ago by Moses M. Feaster30
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Tool: Omicia Opal™ Research - Variant Annotation and Disease-Gene Prioritization
... Omicia's Opal Research is an SaaS platform that integrates a comprehensive, automated genome annotation engine with the VAAST variant prioritization tool to rank gene variants on the severity of their impact on protein function and likelihood to cause disease. Variant Annotation and Disease Gene  ...
interpretation vaast tool annotation written 4.0 years ago by Moses M. Feaster30
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Tool: Phevor: Phenotype Driven Variant Ontological Re-Ranking Tool
... Phevor integrates phenotype, gene function, and disease information with personal genomic data for improved power to identify disease-causing alleles.  Phevor works by combining knowledge resident in multiple biomedical ontologies with the outputs of variant prioritization tools.  It does so using a ...
interpretation prioritization phevor vaast tool written 4.0 years ago by Moses M. Feaster30 • updated 4 months ago by trustedagent10

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