User: Dataman

gravatar for Dataman
Dataman250
Reputation:
250
Status:
Trusted
Location:
Finland
Last seen:
1 week, 3 days ago
Joined:
4 years ago
Email:
b******************@yahoo.com

Bioinfotmatics Master's student!

Posts by Dataman

<prev • 60 results • page 1 of 6 • next >
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Comment: C: What Makes One Probability Distribution Better For Rna-Seq Than Another?
... the link was broken. Here is the link: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0016327 Look for figure 1. ...
written 8 weeks ago by Dataman250
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Comment: C: Why Is Snp Data Generally Restricted?
... Maybe this article be helpful for your latter question: http://science.sciencemag.org/content/305/5681/183 ...
written 7 months ago by Dataman250
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Comment: C: Forward And Reverse Strand Conventions
... > For 50% of genes, its coding strand will correspond to the chromosome's forward strand, and for the other 50% it will correspond to the reverse strand. Would you please elaborate where these numbers are coming from? And why exactly 50-50%? Thanks! ...
written 7 months ago by Dataman250
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Comment: C: demultiplexing Illumina output with fastq_multx
... Sure, I will let you know! However, it seems that I am also going to use the MiSeq Reporter for de-multiplexing even though I have not had time to figure it out how. I assume that I should make a sample sheet file and in the sample sheet I should set the workflow to be 'de-multiplexing' or something ...
written 9 months ago by Dataman250
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Comment: C: demultiplexing Illumina output with fastq_multx
... Were you able to solve your problem? How did you do it? ...
written 9 months ago by Dataman250
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Comment: C: Calculating GC content from BAM file by BED file
... I am wondering why the GC content is calculated here for a BAM file and not for example from reference genome. Does this imply that if one has 100 samples, she has to calculate the GC content for each sample separately? ...
written 15 months ago by Dataman250
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Comment: C: Bioinformatics courses, workshops or training
... Hi Deepak! I was replying to Carlo's post and not your list! ...
written 15 months ago by Dataman250
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Comment: C: Bioinformatics courses, workshops or training
... It seems that some of the courses in the provided link are not FREE! These days people can find very many quality options from best universities all over the world for FREE. ...
written 15 months ago by Dataman250
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Comment: C: Subsampling Bam File With Samtools
... You could accept one of the answers as the final answer. ...
written 17 months ago by Dataman250
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Comment: C: What is difference between soft-clipped and hard-clipped in SAM specification?
... @Calvin: This might answer your question: https://www.biostars.org/p/109333/ ...
written 18 months ago by Dataman250

Latest awards to Dataman

Epic Question 18 days ago, created a question with more than 10,000 views. For samtools bedcov vs. bedtools coverage
Popular Question 4 months ago, created a question with more than 1,000 views. For what does Num_Probes in a segmentation file refer to?
Great Question 12 months ago, created a question with more than 5,000 views. For samtools bedcov vs. bedtools coverage
Popular Question 14 months ago, created a question with more than 1,000 views. For What is the best way to make a bam file smaller by removing unwanted information?
Popular Question 20 months ago, created a question with more than 1,000 views. For Does one need to sort and index after performing a rmdup in Samtools?
Popular Question 23 months ago, created a question with more than 1,000 views. For Breaking down the reference genome chromosome-wise
Popular Question 2.0 years ago, created a question with more than 1,000 views. For Breaking down the reference genome chromosome-wise
Good Question 2.1 years ago, asked a question that was upvoted at least 5 times. For samtools bedcov vs. bedtools coverage
Appreciated 2.1 years ago, created a post with more than 5 votes. For samtools bedcov vs. bedtools coverage
Student 2.1 years ago, asked a question with at least 3 up-votes. For samtools bedcov vs. bedtools coverage
Voter 3.0 years ago, voted more than 100 times.
Supporter 3.9 years ago, voted at least 25 times.

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