User: The Last Word

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The Last Word150
Reputation:
150
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India
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2 days, 13 hours ago
Joined:
3 years, 12 months ago
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Posts by The Last Word

<prev • 65 results • page 1 of 7 • next >
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Comment: C: Scale-free networks are rare
... I was incidentally trying to prove that my network has scale free property and is not just a random collection of nodes. ...
written 4 days ago by The Last Word150
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Comment: C: Scale-free networks are rare
... yes you got it right. ...
written 4 days ago by The Last Word150
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Scale-free networks are rare
... I recently read the paper titled "Scale free networks are rare" [(reference)][1]. This gives me heart because my very own network clusters had a degree exponent value ranging from 0.8 to 1.2 when ideal scale free networks are said to have a slope value between 2 and 3. I have two questions. 1. In ...
cytoscape written 4 days ago by The Last Word150
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Bipartite network analysis using cytoscape
... Hi, I have a bipartite network of transcription factors and genes. I used network analyzer in Cytoscape and got a very low density for the network which is to be expected if density measurement is done for the network in the conventional way. I however found a paper which disputed that all measurem ...
cytoscape bipartite written 4 days ago by The Last Word150
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How to create a gene network
... Hi, I am trying to create a network from a set of genes that I have. The issue I have is that most of the genes are predicted and the organism I am working with is a type of termite. Hence, I cannot use Genemania which can only be used for genes from specific species like humans, flies etc. I canno ...
network written 10 weeks ago by The Last Word150
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Comment: C: CSV format for BLAST result download missing
... I got it thanks..... ...
written 10 weeks ago by The Last Word150
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Comment: C: CSV format for BLAST result download missing
... Did you find the option when you clicked the option Download on the BLAST result page on NCBI? ...
written 10 weeks ago by The Last Word150
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CSV format for BLAST result download missing
... Hi, I just ran a BLASTN in NCBI and I am suddenly missing the option to download my results in CSV format. Has NCBI taken away this option. Is it just me or does none of you have this format to work with. Kindly clarify. ...
blast written 10 weeks ago by The Last Word150
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Analyze network clusters with not much biological information
... I have a set of eight clusters from a larger gene regulatory network consisting of transcription factors and the genes they regulate (bipartite network). The problem is that most of the genes in all those clusters are uncharacterized genes. I am hence not able to derive much biological information f ...
network written 12 weeks ago by The Last Word150 • updated 10 weeks ago by Biostar ♦♦ 20
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Checking the degree Distribution of a network after clustering
... Hi, I had a real world gene network (with scale free distribution) that I clustered into eight parts. I further checked the degree distribution of these eight clusters to check if it conformed to a power law distribution. I have an advisory committee and one of my committee members ended up asking ...
degree distribution cytoscape written 3 months ago by The Last Word150 • updated 6 weeks ago by Biostar ♦♦ 20

Latest awards to The Last Word

Popular Question 4 months ago, created a question with more than 1,000 views. For Obtaining WoLFPSORT and PSORT II
Popular Question 4 months ago, created a question with more than 1,000 views. For Obtaining WoLFPSORT and PSORT II
Popular Question 6 months ago, created a question with more than 1,000 views. For Obtaining WoLFPSORT and PSORT II
Scholar 6 months ago, created an answer that has been accepted. For A: Error on using BEAST
Supporter 6 months ago, voted at least 25 times.
Popular Question 12 months ago, created a question with more than 1,000 views. For Structure prediction on DNA folding form or RNA folding form
Great Question 17 months ago, created a question with more than 5,000 views. For PAML input file format
Popular Question 17 months ago, created a question with more than 1,000 views. For Structure prediction on DNA folding form or RNA folding form
Student 17 months ago, asked a question with at least 3 up-votes. For RepeatMasker library out of date.
Popular Question 23 months ago, created a question with more than 1,000 views. For Error on using BEAST
Popular Question 23 months ago, created a question with more than 1,000 views. For PAML input file format
Popular Question 2.3 years ago, created a question with more than 1,000 views. For Error on using BEAST
Popular Question 2.8 years ago, created a question with more than 1,000 views. For ncRNA Vs miRNA
Popular Question 2.8 years ago, created a question with more than 1,000 views. For PAML input file format
Popular Question 3.1 years ago, created a question with more than 1,000 views. For PAML input file format
Scholar 3.2 years ago, created an answer that has been accepted. For A: Error on using BEAST

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