User: zero_hsy

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zero_hsy100
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China
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4 years, 3 months ago
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Posts by zero_hsy

<prev • 52 results • page 1 of 6 • next >
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(Closed) Is "MDA231" equivalent to "MDA-MB-231" ?
... Hello:     What I want to know is whether "MDA231" is equivalent to "MDA-MB-231". Could anyone tell me?    Thanks a lot! ...
cell line abbreviation written 4.3 years ago by zero_hsy100 • updated 4.3 years ago by Obi Griffith18k
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How to get lincscloud data when the data is in the Amazon S3 ?
... Hello:     I was processing the lincscloud data from http://download.lincscloud.org/. However,All of CMap/LINCS's data is stored in Amazon S3. Coud anyone who have used Amazon S3 tell me how to get the data?    Thanks a lot! ...
lincscloud amazon s3 written 4.3 years ago by zero_hsy100 • updated 4.3 years ago by Zhilong Jia1.5k
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How to define the gene value if a gene is represented by multiple probe sets
... Hello:      I was doing .cel.And when I mapped the probe id to gene symbol, I found sometimes a gene is represented by multiple probe sets. How to define this gene value? ...
cel probe id gene value written 4.5 years ago by zero_hsy100 • updated 4.5 years ago by Irsan7.0k
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Comment: C: How to open the .BIN in the NCI DTP Data
... Thanks a lot! I have opened it successfully in your method. And could I ask another question? I have downloaded the NCI60 drug-response from CellMiner. It is the same with the .BIN. The difference is that it is somewhat processed. What confused me is as the followings: drug      cell_line_1_gi50 ...
written 4.6 years ago by zero_hsy100
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How to open the .BIN in the NCI DTP Data
... Hello:     I want to download the drug-response raw data on the NCI60. I found the url is  https://wiki.nci.nih.gov/display/NCIDTPdata/NCI-60+Growth+Inhibition+Data. However, the data is .BIN data.When I open it with notepad++, it is messy code.    Could anyone tell me how to open the .BIN file w ...
nci60 nci-60 growth inhibition data written 4.6 years ago by zero_hsy100 • updated 4.6 years ago by Pierre Lindenbaum124k
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(Closed) How to open the .BIN in the NCI DTP Data
... Hello:     I want to download the drug-response raw data on the NCI60. I found the url is  https://wiki.nci.nih.gov/display/NCIDTPdata/NCI-60+Growth+Inhibition+Data. However, the data is .BIN data.When I open it with notepad++, it is messy code.    Could anyone tell me how to open the .BIN file w ...
nci60 nci-60 growth inhibition data written 4.6 years ago by zero_hsy100
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Is there any standard on defining the drug sensitive and resistant cell lines with IC50 values?
... Hello:     I am wondering how to define drug resistant and sensitive cell lines when knowing the IC50 values. I have known the lower , the more sensitive and the higher, the more resistant.     However,if I get a lot of IC50 values in one drug, how to define the sensitive and resistant? Is there a ...
drug resistant drug sensitive ic50 written 4.6 years ago by zero_hsy100 • updated 4.4 years ago by Biostar ♦♦ 20
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What is the name of article related with NCI60, CCLE, CMAP?
... Hello:      I want to find some articles which is related with the NCI60, CCLE,CMAP. For example, "Inconsistency in large pharmacogenomic studies" is about the inconsistency between CCLE and CGP.     Could anyone tell me more articles like this? ...
article ccle nci60 cmap written 4.6 years ago by zero_hsy100
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Comment: C: How to define drug_resistant or drug_sensitive when knowing the IC50 values?
... Thanks a lot! ...
written 4.6 years ago by zero_hsy100
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Could anyone send me the data about dataset 20006-20007 on LINCS Harvard?
... Hello:     I want to get the raw data from LINCS Harvard. The url is http://lincs.hms.harvard.edu/db/datasets/20006/.Unfortunely, It is said that "The data for this assay have been removed (Dec 2013) for evaluation".    Is there anybody who have downloaded the raw data before Dec 2013? Could you s ...
lincs written 4.6 years ago by zero_hsy100 • updated 4.5 years ago by PoGibas4.8k

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