User: Renesh

gravatar for Renesh
Renesh1.8k
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Joined:
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Posts by Renesh

<prev • 198 results • page 1 of 20 • next >
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Comment: C: Assigning proteins to pre-computed gene families
... https://onlinelibrary.wiley.com/doi/full/10.1002/pld3.191 ...
written 3 months ago by Renesh1.8k
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Answer: A: Tool to generate proportional Venn Diagrams?
... Try this for proportional Venn diagrams https://reneshbedre.github.io/blog/venn.html ...
written 3 months ago by Renesh1.8k
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Comment: C: Moving sequence in to next line in multi fasta file
... You need to add a new line character `\n` explicitly. Which programming language you are using? Provide your code to answer your question perfectly. ...
written 4 months ago by Renesh1.8k
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Comment: C: How to group genes in a single genome into gene families?
... As I mentioned in my answer, you can use the similarity approach (BLAST) to identify gene families. But you will miss a lot of genes that can be grouped into gene families. The similarity approach would not able to identify divergent or distantly related homologs effectively. The domain-based approa ...
written 4 months ago by Renesh1.8k
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Answer: A: Bioinformatics to Data Analyst
... Yes, you can choose a career as data analysts with your Msc Bioinformatics degree. It is a good choice. You can work in Academics, Industries, Hospitals, and genomics research centers. In addition, you can also opt to pursue a Ph.D. in Bioinformatics. ...
written 4 months ago by Renesh1.8k
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Answer: A: How to group genes in a single genome into gene families?
... You need to use a domain-based (PFAM) database to identify gene families. The highly conserved domains define protein functions and classify protein-coding genes into gene families. The conserved signature protein domains have the ability to detect the divergent or distantly related homologs which w ...
written 4 months ago by Renesh1.8k
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Answer: A: How To Draw A Csv Data File As A Heatmap Using Numpy And Matplotlib
... https://reneshbedre.github.io/blog/hmap.html ...
written 4 months ago by Renesh1.8k
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Answer: A: Plotting CNV matrix as heatmap using python
... https://reneshbedre.github.io/blog/hmap.html ...
written 4 months ago by Renesh1.8k
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Answer: A: Generating cluster heat map
... https://reneshbedre.github.io/blog/hmap.html ...
written 4 months ago by Renesh1.8k
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Comment: C: How to calculate the coverage in targeted sequencing?
... Yes, the code is implemented using Lander/Waterman equation ...
written 4 months ago by Renesh1.8k

Latest awards to Renesh

Appreciated 12 weeks ago, created a post with more than 5 votes. For A: Does read-depth refer to a fold?
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Does read-depth refer to a fold?
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Masters Ideas in Computer Science that tackles Bioinformatics Problem
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: How do you organize your articles?
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Microarray to Protein Interaction Network
Popular Question 12 months ago, created a question with more than 1,000 views. For Cufflink p-value using blind dispersion method
Epic Question 15 months ago, created a question with more than 10,000 views. For Extract specific patter from string in MySQL:
Scholar 15 months ago, created an answer that has been accepted. For A: Is there a way to know sequences length when querying ENA programmatically?
Scholar 16 months ago, created an answer that has been accepted. For A: Is there a way to know sequences length when querying ENA programmatically?
Good Answer 16 months ago, created an answer that was upvoted at least 5 times. For A: Volcano Plot from DEseq2
Appreciated 16 months ago, created a post with more than 5 votes. For A: Does read-depth refer to a fold?
Scholar 16 months ago, created an answer that has been accepted. For A: Is there a way to know sequences length when querying ENA programmatically?
Teacher 16 months ago, created an answer with at least 3 up-votes. For A: Masters Ideas in Computer Science that tackles Bioinformatics Problem
Librarian 16 months ago, created a post with more than 10 bookmarks. For Gene expression units explained: RPM, RPKM, FPKM and TPM
Teacher 17 months ago, created an answer with at least 3 up-votes. For A: Masters Ideas in Computer Science that tackles Bioinformatics Problem
Appreciated 22 months ago, created a post with more than 5 votes. For A: Does read-depth refer to a fold?
Epic Question 22 months ago, created a question with more than 10,000 views. For Extract specific patter from string in MySQL:
Prophet 22 months ago, created a post with more than 20 followers. For Gene expression units explained: RPM, RPKM, FPKM and TPM
Epic Question 2.1 years ago, created a question with more than 10,000 views. For Extract specific patter from string in MySQL:
Great Question 2.1 years ago, created a question with more than 5,000 views. For Gene expression units explained: RPM, RPKM, FPKM and TPM
Teacher 2.4 years ago, created an answer with at least 3 up-votes. For A: Masters Ideas in Computer Science that tackles Bioinformatics Problem
Appreciated 2.4 years ago, created a post with more than 5 votes. For A: Does read-depth refer to a fold?
Popular Question 2.4 years ago, created a question with more than 1,000 views. For How to use seek() with Biopython SeqIO object
Popular Question 2.4 years ago, created a question with more than 1,000 views. For Cufflink p-value using blind dispersion method
Scholar 2.5 years ago, created an answer that has been accepted. For A: Is there a way to know sequences length when querying ENA programmatically?

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