User: hnp21

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hnp2140
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New User
Location:
United States
Last seen:
2 years, 11 months ago
Joined:
4 years, 8 months ago
Email:
h****@msstate.edu

Posts by hnp21

<prev • 4 results • page 1 of 1 • next >
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Comment: C: BLAST: Identity % and Similarity %
... Thank you so much for the reply. What I wanted to know was, how to get both Identity % and similarity % in a blast output. When I use web-BLAST, I just get Identity % but not the similarity %. Is there any command which could be used to get both Identity % and similarity % during BLAST analysis? ...
written 3.0 years ago by hnp2140
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BLAST: Identity % and Similarity %
... Hello Biostars! Could you please tell me how to get both Identity % and similarity % of a blast (nucleotide) output? Web-BLAST just gives the identity %. Appreciate your input! ...
blast written 3.0 years ago by hnp2140 • updated 3.0 years ago by natasha.sernova3.4k
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RNa seq data: GO annotation
... Hello Biotsrars! I have a question for you about GO annotation of RNA seq data: I have differentially expressed genes (used Edge R to analyze RNA seq data) and I need know GO terms of those genes. I have GO terms for most of the transcripts and I got those GO terms (with IDs) directly from the refe ...
gene rna-seq sequencing written 3.0 years ago by hnp2140 • updated 10 days ago by RamRS21k
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To locate some introgressed QTL regions of an assembly?
... I need to locate some introgressed QTL regions of an assembly (resulted from backcrossing) to analyze those regions further. I have SSR marker sequences (associated with those QTL regions) as well.  Would you be able to suggest a free and open-source tool to locate those QTL regions of the assembly ...
genome alignment sequence blast written 4.6 years ago by hnp2140

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