User: memy

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memy0
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Posts by memy

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Comment: C: Polish PacBio assembly with latest PacBio tools : an affordable solution for eve
... gcpp step crushes with the following error message > terminate called after throwing an instance of '(anonymous > namespace)::CommandLineParserException' what(): [pbcopper] command > line parser ERROR: unknown option 'n' ...
written 4 weeks ago by memy0
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Comment: C: Platanus_allee assembler failed contig assembly
... Hi I have got the same issue on v2.2.2 and share it [here][1]. The tools seems to have unresolved bug and I reported [here][2] hoping any fix. [1]: https://www.biostars.org/p/431366/ [2]: https://www.nature.com/articles/s41467-019-09575-2/email/correspondent/c1/new ...
written 3 months ago by memy0
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Platanus-allee phasing fail: Error(13): Error, SolveDBG exception!!
... Hello there, I am using Platanus-allee 2.2.2 to generate hybrid assembly of Illumina short reads and PacBio reads. I have got contigs.fa from short reads but phasing step with PacBio reads gives the following error after running for couple of hours > Error(13): Error, SolveDBG exception!! plata ...
genome assembly next-gen software error written 3 months ago by memy0

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