User: Yannick Wurm

gravatar for Yannick Wurm
Yannick Wurm2.2k
Reputation:
2,210
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Location:
Queen Mary University London
Website:
http://yannick.poulet.org
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Google Scholar Page
Last seen:
1 month ago
Joined:
7 years, 6 months ago
Email:
y*****@qmul.ac.uk

Bioinformaticist studying the evolution of ant societies. Some recent stuff:

enjoy NGS, ruby & bioconductor

Posts by Yannick Wurm

<prev • 154 results • page 1 of 16 • next >
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Comment: C: Reliable Fastq compression programs
... So what did you settle on? ...
written 6 weeks ago by Yannick Wurm2.2k
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Comment: C: Tool to generate a chain file from an agp file
... Hi - did you figure this out? ...
written 4 months ago by Yannick Wurm2.2k
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Answer: A: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... There have been a bunch of revisions/improvements since those posts. My writing today is to announce our pre-publication manuscript:  Biorxiv:  http://dx.doi.org/10.1101/033142 Sequenceserver: a modern graphical user interface for custom BLAST databases Anurag Priyam, Ben J Woodcroft, Vivek Rai, ...
written 21 months ago by Yannick Wurm2.2k
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Comment: C: What Is A Good Web Front End For (Blast) Homology Search?
... (FYI there's been quite a few updates since this...) ...
written 23 months ago by Yannick Wurm2.2k
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Comment: C: Database of genes with manually curated/fixed sequences?
... Thanks Andrzej - this is v helpful. I didn't realize this distinction. Do you know whether the 2 types of submissions people sequencing a new genome make would be similarly differentiated? ...
written 24 months ago by Yannick Wurm2.2k
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Database of genes with manually curated/fixed sequences?
... When working with gene sequences from an understudied species, it can be challenging to know whether the gene prediction model is correct. Methods for determining this include comparisons to other "known" gene predictions as well as RNAseq data - manually or with the help of tools like GeneValidator ...
similarity gene prediction homology database written 24 months ago by Yannick Wurm2.2k • updated 24 months ago by a.zielezinski7.3k
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Answer: A: Optimal design for bioinformatics "lab" space?
... Standing-sitting desks for everyone.  ...
written 2.4 years ago by Yannick Wurm2.2k
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Answer: A: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... Quick heads up that we recently released a new update resulting from a complete rewrite. It includes:  graphcial overview flexible downloading guided configuration (e.g. downloads BLAST binaries if needed) beautiful user interface (much better than before) Accessible at http://sequenceserver ...
written 2.5 years ago by Yannick Wurm2.2k
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Comment: C: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... Hi @farman - sorry you've struggled with this & apologies I didn't see your message earlier. I hope you found some help on the sequenceserver mailing list accessible from http://sequenceserver.com ...
written 2.5 years ago by Yannick Wurm2.2k
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Comment: C: Permanent bioinformatics job @QMUL Central London
... Hey thanks Giovanni :o) You should apply :)   ...
written 2.5 years ago by Yannick Wurm2.2k

Latest awards to Yannick Wurm

Appreciated 7 weeks ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Appreciated 8 weeks ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Appreciated 11 months ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Popular Question 11 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Great Question 11 months ago, created a question with more than 5,000 views. For How To Download All Est Sequences For Organism Xx From Ncbi?
Popular Question 16 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Epic Question 17 months ago, created a question with more than 10,000 views. For Duplicate Paired-End Illumina Reads
Great Question 19 months ago, created a question with more than 5,000 views. For Duplicate Paired-End Illumina Reads
Popular Question 19 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Popular Question 19 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Popular Question 21 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
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Student 24 months ago, asked a question with at least 3 up-votes. For Automagically Remove "Badly" Aligning Sequence From Multiple-Sequence Alignment
Popular Question 2.0 years ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Teacher 2.4 years ago, created an answer with at least 3 up-votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Teacher 2.5 years ago, created an answer with at least 3 up-votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Appreciated 2.5 years ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
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Teacher 2.7 years ago, created an answer with at least 3 up-votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Student 2.7 years ago, asked a question with at least 3 up-votes. For Crowdsourcing Game - Manual Annotation
Popular Question 3.2 years ago, created a question with more than 1,000 views. For Automagically Remove "Badly" Aligning Sequence From Multiple-Sequence Alignment
Great Question 3.3 years ago, created a question with more than 5,000 views. For Duplicate Paired-End Illumina Reads
Popular Question 3.3 years ago, created a question with more than 1,000 views. For Big Ass Servers & Storage

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