User: Yannick Wurm

gravatar for Yannick Wurm
Yannick Wurm2.3k
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Location:
Queen Mary University London
Website:
http://yannick.poulet.org
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Last seen:
4 days ago
Joined:
8 years, 3 months ago
Email:
y*****@qmul.ac.uk

Bioinformaticist studying the evolution of ant societies. Some recent stuff:

enjoy NGS, ruby & bioconductor

Posts by Yannick Wurm

<prev • 155 results • page 1 of 16 • next >
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Job: Postdoc: Population & comparative genomics of bumblebees, Queen Mary University, London, UK
... Bees and other pollinators are essential for preserving biodiversity and ensuring agricultural yields. Reports of their declines worldwide are thus concerning. We use molecular tools to understand how pollinators are affected by changing environments and their abilities to cope with such changes. W ...
population genomics molecular evolution job written 5 weeks ago by Yannick Wurm2.3k • updated 5 weeks ago by genomax50k
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Comment: C: Reliable Fastq compression programs
... So what did you settle on? ...
written 10 months ago by Yannick Wurm2.3k
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Comment: C: Tool to generate a chain file from an agp file
... Hi - did you figure this out? ...
written 14 months ago by Yannick Wurm2.3k
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Answer: A: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... There have been a bunch of revisions/improvements since those posts. My writing today is to announce our pre-publication manuscript:  Biorxiv:  http://dx.doi.org/10.1101/033142 Sequenceserver: a modern graphical user interface for custom BLAST databases Anurag Priyam, Ben J Woodcroft, Vivek Rai, ...
written 2.5 years ago by Yannick Wurm2.3k
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Comment: C: What Is A Good Web Front End For (Blast) Homology Search?
... (FYI there's been quite a few updates since this...) ...
written 2.7 years ago by Yannick Wurm2.3k
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Comment: C: Database of genes with manually curated/fixed sequences?
... Thanks Andrzej - this is v helpful. I didn't realize this distinction. Do you know whether the 2 types of submissions people sequencing a new genome make would be similarly differentiated? ...
written 2.8 years ago by Yannick Wurm2.3k
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Database of genes with manually curated/fixed sequences?
... When working with gene sequences from an understudied species, it can be challenging to know whether the gene prediction model is correct. Methods for determining this include comparisons to other "known" gene predictions as well as RNAseq data - manually or with the help of tools like GeneValidator ...
similarity gene prediction homology database written 2.8 years ago by Yannick Wurm2.3k • updated 2.8 years ago by a.zielezinski8.3k
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Answer: A: Optimal design for bioinformatics "lab" space?
... Standing-sitting desks for everyone.  ...
written 3.2 years ago by Yannick Wurm2.3k
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Answer: A: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... Quick heads up that we recently released a new update resulting from a complete rewrite. It includes:  graphcial overview flexible downloading guided configuration (e.g. downloads BLAST binaries if needed) beautiful user interface (much better than before) Accessible at http://sequenceserver ...
written 3.3 years ago by Yannick Wurm2.3k
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Comment: C: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... Hi @farman - sorry you've struggled with this & apologies I didn't see your message earlier. I hope you found some help on the sequenceserver mailing list accessible from http://sequenceserver.com ...
written 3.3 years ago by Yannick Wurm2.3k

Latest awards to Yannick Wurm

Student 7 months ago, asked a question with at least 3 up-votes. For Database of genes with manually curated/fixed sequences?
Popular Question 7 months ago, created a question with more than 1,000 views. For Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
Appreciated 7 months ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Popular Question 7 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Great Question 10 months ago, created a question with more than 5,000 views. For Programmatically Retrieve Info About Articles Citing My Article
Appreciated 10 months ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Appreciated 11 months ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Appreciated 20 months ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Popular Question 20 months ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Great Question 21 months ago, created a question with more than 5,000 views. For How To Download All Est Sequences For Organism Xx From Ncbi?
Popular Question 2.1 years ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Epic Question 2.2 years ago, created a question with more than 10,000 views. For Duplicate Paired-End Illumina Reads
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Great Question 2.4 years ago, created a question with more than 5,000 views. For Duplicate Paired-End Illumina Reads
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Student 2.8 years ago, asked a question with at least 3 up-votes. For Automagically Remove "Badly" Aligning Sequence From Multiple-Sequence Alignment
Popular Question 2.8 years ago, created a question with more than 1,000 views. For 454Newblermetrics.Txt Format
Teacher 3.2 years ago, created an answer with at least 3 up-votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Teacher 3.3 years ago, created an answer with at least 3 up-votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Appreciated 3.3 years ago, created a post with more than 5 votes. For A: What Is Your Experience With Gmod Tools Or Alternatives?
Popular Question 3.3 years ago, created a question with more than 1,000 views. For Multiplexed Rnaseq

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