User: Yannick Wurm

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Yannick Wurm2.2k
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Location:
Queen Mary University London
Website:
http://yannick.poulet.org
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Last seen:
1 week, 4 days ago
Joined:
7 years ago
Email:
y*****@qmul.ac.uk

Bioinformaticist studying the evolution of ant societies. Some recent stuff:

enjoy NGS, ruby & bioconductor

Posts by Yannick Wurm

<prev • 152 results • page 1 of 16 • next >
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Answer: A: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... There have been a bunch of revisions/improvements since those posts. My writing today is to announce our pre-publication manuscript:  Biorxiv:  http://dx.doi.org/10.1101/033142 Sequenceserver: a modern graphical user interface for custom BLAST databases Anurag Priyam, Ben J Woodcroft, Vivek Rai, ...
written 15 months ago by Yannick Wurm2.2k
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Comment: C: What Is A Good Web Front End For (Blast) Homology Search?
... (FYI there's been quite a few updates since this...) ...
written 17 months ago by Yannick Wurm2.2k
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Comment: C: Database of genes with manually curated/fixed sequences?
... Thanks Andrzej - this is v helpful. I didn't realize this distinction. Do you know whether the 2 types of submissions people sequencing a new genome make would be similarly differentiated? ...
written 18 months ago by Yannick Wurm2.2k
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Database of genes with manually curated/fixed sequences?
... When working with gene sequences from an understudied species, it can be challenging to know whether the gene prediction model is correct. Methods for determining this include comparisons to other "known" gene predictions as well as RNAseq data - manually or with the help of tools like GeneValidator ...
similarity gene prediction homology database written 18 months ago by Yannick Wurm2.2k • updated 18 months ago by a.zielezinski6.2k
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Answer: A: Optimal design for bioinformatics "lab" space?
... Standing-sitting desks for everyone.  ...
written 23 months ago by Yannick Wurm2.2k
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Answer: A: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... Quick heads up that we recently released a new update resulting from a complete rewrite. It includes:  graphcial overview flexible downloading guided configuration (e.g. downloads BLAST binaries if needed) beautiful user interface (much better than before) Accessible at http://sequenceserver ...
written 2.0 years ago by Yannick Wurm2.2k
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Comment: C: Sequenceserver: Easily Deploy A Custom, User-Friendly Blast Webserver
... Hi @farman - sorry you've struggled with this & apologies I didn't see your message earlier. I hope you found some help on the sequenceserver mailing list accessible from http://sequenceserver.com ...
written 2.0 years ago by Yannick Wurm2.2k
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Comment: C: Permanent bioinformatics job @QMUL Central London
... Hey thanks Giovanni :o) You should apply :)   ...
written 2.0 years ago by Yannick Wurm2.2k
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Job: Permanent bioinformatics job @QMUL Central London
... More extensive ad is here: http://bit.ly/genehack  There is quite a bit of flexibility with the role; let me know if any questions.  Twitter ad.       ...
bioinformatics ngs unix genomics job written 2.0 years ago by Yannick Wurm2.2k
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Comment: C: Deindexer - A Standalone Demultiplexing Tool For Illumina Platform
... Does it accept variable-length barcodes? ...
written 2.1 years ago by Yannick Wurm2.2k

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