User: salvocamiolo

gravatar for salvocamiolo
salvocamiolo20
Reputation:
20
Status:
New User
Location:
Italy
Last seen:
3 days, 4 hours ago
Joined:
4 years, 4 months ago
Email:
s***********@gmail.com

Posts by salvocamiolo

<prev • 8 results • page 1 of 1 • next >
0
votes
1
answer
128
views
1
answers
Comment: C: Cuffdiff in highly different samples
... Thanks a lot for your answer and sorry for not being totally clear. The sample is actually made of two species: an organism and a virus infecting it. The three datasets are the organism genes, the viral genes, and the viral non coding RNA. With the knock down experiments I removed the non coding RNA ...
written 27 days ago by salvocamiolo20
3
votes
1
answer
128
views
1
answer
Cuffdiff in highly different samples
... Hello everyone, I have got a question about the way Cuffdiff work in determining the genes that are differently expressed. I give you a quick example of what I got. In Sample (a) I have three datasets of genes that are expressed featuring the following percentage of the total reads Dataset_A ...
cufflinks rna-seq written 28 days ago by salvocamiolo20 • updated 28 days ago by genomax63k
1
vote
1
answer
1.2k
views
1
answer
HMMER search on conserved domain database
... Dear All,   I am trying to identify conserved domains in my proteins. I would like to use the Conserved domain database (CDD) since I know it is the most complete, and I would like to the my search with hmmer that I know is very precise. In the ftp site of CDD I found theposition-specific scoring ...
forum domains cdd hmmer written 3.1 years ago by salvocamiolo20 • updated 3.1 years ago by Jean-Karim Heriche18k
0
votes
3
answers
2.9k
views
3
answers
Answer: A: Breakdancer installing problem
... Ok Guys, I thing I sorted it out. The installing instructions generated the error I reported on opensuse 12.2. I then downloaded the cpp/perl package from sourceforgenet. In order to compile the cpp part I had to change the path of the samtools package as suggested by RamRS (thanks for that). Moreo ...
written 4.4 years ago by salvocamiolo20
0
votes
3
answers
2.9k
views
3
answers
Answer: A: Breakdancer installing problem
... Hi there, yes I followed those instructions and get the error upon trying the "make" step. ...
written 4.4 years ago by salvocamiolo20
0
votes
3
answers
2.9k
views
3
answers
Comment: C: Breakdancer installing problem
... thanks for the reply! I am running opensuse 12.2 ...
written 4.4 years ago by salvocamiolo20
0
votes
3
answers
2.9k
views
3
answers
Comment: C: Breakdancer installing problem
... that was just a try. Since I got the same error by running just "make" I tried also running "make" with super user .   ...
written 4.4 years ago by salvocamiolo20
1
vote
3
answers
2.9k
views
3
answers
Breakdancer installing problem
...     Hi guys I am trying to install breakdancer on my opensuse distro. When I run "make" I receive the following error:   [code] [ 14%] Built target boost-libs [ 15%] Performing build step for 'samtools-lib' make[2]: *** [vendor/src/samtools-lib-stamp/samtools-lib-build] Errore 2 make[1]: *** [ ...
software error written 4.4 years ago by salvocamiolo20

Latest awards to salvocamiolo

Popular Question 3.1 years ago, created a question with more than 1,000 views. For HMMER search on conserved domain database
Popular Question 4.0 years ago, created a question with more than 1,000 views. For Breakdancer installing problem

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2156 users visited in the last hour