User: lethanhx2k

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lethanhx2k10
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3 months, 4 weeks ago
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4 years, 1 month ago
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Posts by lethanhx2k

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Answer: A: Install RAxML on Mac
... If you compiled, no errors returned and you want to execute the program from inside the source folder, you have to type "./raxmlHPC" (no " when you type in the terminal) Another way less headache is to use bioconda. Some simple steps in the followings: - Install miniconda2 (or 3) - Add bioconda c ...
written 14 months ago by lethanhx2k10
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Answer: A: Coverage analysis of NGS data by Depth
... [qualimap][1] can generate a report as you wanted. Simple command: `qualimap bamqc -bam you_bam_file.bam -outfile report.pdf -outformat PDF` A portion of the report for example: >>>>>>> Coverage mean coverageData = 32.3065X std coverageData = 48.0755X The ...
written 15 months ago by lethanhx2k10
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Comment: C: Tools To Draw Bayesian Trees
... and then you can use FigTree to draw the trees ...
written 4.1 years ago by lethanhx2k10

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