User: Chenglin

gravatar for Chenglin
Chenglin90
Reputation:
90
Status:
Trusted
Location:
United States
Last seen:
2 years ago
Joined:
3 years, 3 months ago
Email:
c**********@gmail.com

Posts by Chenglin

<prev • 40 results • page 1 of 4 • next >
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Comment: C: how to install samtools
... Thank you very much! Do you think it will be a problem if I don't do the second command " make prefix=/usr/local/bin install"?  ...
written 2.1 years ago by Chenglin90
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Comment: C: how to install samtools
... Thank you very much for your answer. Can you please explain what is the command "make prefix=/where/to/install install" for? I appreciate very much. ...
written 2.1 years ago by Chenglin90
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how to install samtools
... I need  to install samtools. I saw the instruction on the webpage (http://www.htslib.org/download/)  but did not get it.  cd samtools-1.x # and similarly for bcftools and htslib make make prefix=/where/to/install install   what does "make prefix=/where/to/install install" this mean? Do I n ...
next-gen sequencing written 2.1 years ago by Chenglin90
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Comment: C: Pipeline for RNA-seq analysis
... Thank you very much!  ...
written 2.1 years ago by Chenglin90
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Comment: C: Pipeline for RNA-seq analysis
... Thank you very much! ...
written 2.1 years ago by Chenglin90
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Comment: C: Pipeline for RNA-seq analysis
... Thank you very much! I'll take a look. ...
written 2.1 years ago by Chenglin90
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Pipeline for RNA-seq analysis
... Dear all, Happy New Year! I am going to analyze RNA-Seq data. Does anyone would like to share the pipeline for RNA-Seq analysis? I will appreciate it very much. Thank you!   ...
rna-seq written 2.1 years ago by Chenglin90 • updated 2.1 years ago by Constantine150
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Tool: versions of Software used in mutmap
... Hi all, I am going to use MutMAap to identify genomic regions which harbors mutations causing changes in agronomically related traits in rice. I need to  install the following programs as recommended in the protocol:  1. Perl (v5.8.8) 2. R (version 2.15.0) 3. BWA (version 0.5.9-r16) 4. SAMtools ...
next-gen tool sequencing written 2.1 years ago by Chenglin90
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Comment: C: How to count fastq reads
... Hi Jorge, I do see "@" in the quality line. Which command line I can use, please? I am a beginner and I am a little confused.....Sorry. Best regards, Chenglin Chai Ph.D., School of Plant, Environmental, and Soil Sciences Louisiana State University Agricultural Center 207C M.B. Sturgis Hall Baton Ro ...
written 2.8 years ago by Chenglin90
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Comment: C: How count reads
... Thank you so much, I will try. Best regards, Chenglin Chai Ph.D., School of Plant, Environmental, and Soil Sciences Louisiana State University Agricultural Center 207C M.B. Sturgis Hall Baton Rouge, LA 70803, USA Tel: (225) 578-9703 ...
written 2.8 years ago by Chenglin90

Latest awards to Chenglin

Student 2.1 years ago, asked a question with at least 3 up-votes. For Pipeline for RNA-seq analysis
Popular Question 2.8 years ago, created a question with more than 1,000 views. For Problem with using tabix
Popular Question 2.8 years ago, created a question with more than 1,000 views. For How to choose vcf-compare options

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