User: User 5402

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User 5402210
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u1540

Posts by User 5402

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Comment: C: How To Calculate Fpkm (Fragments Per Kilobase Of Exon Per Million Fragments Mapp
... This specific gene only has one transcript according to Cufflinks. Do you think there could there be a problem with the way I am running Cufflinks? I have just been using the defaults and running the Tophat output against the human .gtf file. I am seeing ~30 transcripts that do not fail in the Cuf ...
written 6.2 years ago by User 5402210
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How To Calculate Fpkm (Fragments Per Kilobase Of Exon Per Million Fragments Mapped)
... Hello, Perhaps this has already been answered somewhere, but I am not seeing a satisfactory explanation. I want to understand how one calculates FPKM (fragments per kilobase of exon per million fragments mapped) in RNA-seq data. Everywhere I look, I see people saying that it is the number of read ...
rpkm fpkm rna written 6.2 years ago by User 5402210 • updated 8 months ago by jokipokemon00010

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