User: kloetzl

gravatar for kloetzl
kloetzl740
Reputation:
740
Status:
Trusted
Location:
European Union
Website:
http://kloetzl.info/
Twitter:
kloetzl
Scholar ID:
Google Scholar Page
Last seen:
an hour ago
Joined:
2 years, 10 months ago
Email:
k******@evolbio.mpg.de

Posts by kloetzl

<prev • 102 results • page 1 of 11 • next >
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Comment: C: Quick help: How can I find and replace a specific nucleotide within a gene seque
... I prefer CRISPR with vim bindings. ...
written 5 days ago by kloetzl740
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148
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Comment: C: segmentation fault (core dumped) error when using BWA and BOWTIE
... Checking RAM is easy. However, I doubt it is a hardware failure, rather than a simple memory access error. After all, an invalid read is undefined behaviour. Anything can happen. ...
written 7 days ago by kloetzl740
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Comment: C: segmentation fault (core dumped) error when using BWA and BOWTIE
... A segfault indicates a programming error. Did you double check your inputs? Maybe they are weirdly formatted. ...
written 9 days ago by kloetzl740
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1
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Comment: C: bowtie build error
... That doesn't answer any of the questions I pointed out, above. ...
written 10 days ago by kloetzl740
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2
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Comment: C: Number of Threads for BWA MEM
... > There will be a theoretical optimum Did you mean [Amdahl's law](https://en.wikipedia.org/wiki/Amdahl%27s_law)? ...
written 10 days ago by kloetzl740
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Comment: C: bowtie build error
... The current version of bowtie is 1.2.2. Bowtie2 is at 2.3.4. Why are you trying to build an ancient version? Better use a package manager. ...
written 11 days ago by kloetzl740
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125
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Comment: C: IndexError in nucAlign[p][k]
... This is a Q&A board. Your post does not contain a question. ...
written 26 days ago by kloetzl740
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Comment: C: Seqan read compressed stream
... Well, there is compressed `.bam` and compressed `.gz`. ...
written 4 weeks ago by kloetzl740
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Comment: C: Seqan read compressed stream
... > So seqan didn't detect my stream contain compressed data or seqan can't work on compressed stream, but isn't documented. Usually it is the other way round: Things don't work on compressed data, unless documented. ...
written 4 weeks ago by kloetzl740
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Answer: A: How to remove Bad Nucleotides represented by "N" from FASTA file by using UNIX?
... Using [pfasta](https://github.com/kloetzl/pfasta): % pfasta acgt bad.fasta > good.fasta ...
written 5 weeks ago by kloetzl740

Latest awards to kloetzl

Centurion 7 days ago, created 100 posts.
Scholar 10 weeks ago, created an answer that has been accepted. For A: Convert multiple-sequence fasta file to single long sequence
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Convert multiple-sequence fasta file to single long sequence
Teacher 13 months ago, created an answer with at least 3 up-votes. For A: Convert multiple-sequence fasta file to single long sequence
Commentator 21 months ago, created a comment with at least 3 up-votes. For C: Making a mac book Bioinfo ready (El Capitan)
Teacher 21 months ago, created an answer with at least 3 up-votes. For A: Convert multiple-sequence fasta file to single long sequence
Scholar 21 months ago, created an answer that has been accepted. For A: Convert multiple-sequence fasta file to single long sequence
Teacher 21 months ago, created an answer with at least 3 up-votes. For A: Convert multiple-sequence fasta file to single long sequence
Scholar 21 months ago, created an answer that has been accepted. For A: Convert multiple-sequence fasta file to single long sequence
Scholar 21 months ago, created an answer that has been accepted. For A: Convert multiple-sequence fasta file to single long sequence
Supporter 21 months ago, voted at least 25 times.
Appreciated 21 months ago, created a post with more than 5 votes. For A: FASTA file of fixed length
Good Answer 21 months ago, created an answer that was upvoted at least 5 times. For A: FASTA file of fixed length
Teacher 21 months ago, created an answer with at least 3 up-votes. For A: Convert multiple-sequence fasta file to single long sequence
Scholar 22 months ago, created an answer that has been accepted. For A: Convert multiple-sequence fasta file to single long sequence
Commentator 22 months ago, created a comment with at least 3 up-votes. For C: Making a mac book Bioinfo ready (El Capitan)
Teacher 2.5 years ago, created an answer with at least 3 up-votes. For A: Convert multiple-sequence fasta file to single long sequence
Scholar 2.5 years ago, created an answer that has been accepted. For A: Convert multiple-sequence fasta file to single long sequence

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