User: SmallChess

gravatar for SmallChess
SmallChess460
Reputation:
460
Status:
Trusted
Location:
Australia
Website:
http://www.smallchess....
Twitter:
scchess
Last seen:
3 hours ago
Joined:
3 years, 6 months ago
Email:
w**********@gmail.com

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Posts by SmallChess

<prev • 113 results • page 1 of 12 • next >
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Comment: C: PED file format for use with GATK PhaseByTransmission
... The question is about a child and two parents?? ...
written 6 weeks ago by SmallChess460
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0
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Comment: C: gVCF files into Plink!
... Why no answer here? This sounds like a good question. ...
written 6 weeks ago by SmallChess460
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3
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3
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Comment: C: split fasta of a protein sequence into consecutive n amino acids
... This is the best solution +1 ...
written 8 weeks ago by SmallChess460
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Comment: C: Finding Kmers From Fasta File
... Jellyfish would only work DNA, not proteins. ...
written 8 weeks ago by SmallChess460
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Comment: C: fasta file to tab delimited file
... The accepted answer had "tail -n+2 ", it wouldn't work for multiple lines. ...
written 9 weeks ago by SmallChess460
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Comment: C: fasta file to tab delimited file
... My sample command did indeed converted FASTA to TSV. ...
written 9 weeks ago by SmallChess460
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Answer: A: fasta file to tab delimited file
... Please use the seqkit tool. The accepted solution wouldn't work for multiple lines, so it should be ignored. seqkit fx2tab myFASTA > myTAB ...
written 9 weeks ago by SmallChess460 • updated 9 weeks ago by finswimmer5.3k
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Comment: C: Annotation for SV and CNV
... Not really. VEP doesn't support the very common BND SVType. ...
written 10 weeks ago by SmallChess460
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Comment: C: SOS -- MuTect is picking up obvious germline mutations
... Yes. Apply FilterMutectCalls. ...
written 3 months ago by SmallChess460
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Answer: A: Dbsnp In Vcf
... ftp://ftp.ncbi.nlm.nih.gov/snp/organisms ...
written 3 months ago by SmallChess460

Latest awards to SmallChess

Popular Question 7 weeks ago, created a question with more than 1,000 views. For How to convert VarScan TAB format to VCF?
Popular Question 9 weeks ago, created a question with more than 1,000 views. For How to convert VarScan TAB format to VCF?
Great Question 3 months ago, created a question with more than 5,000 views. For How to generate BedGraph from BedTools Coverage?
Popular Question 5 months ago, created a question with more than 1,000 views. For C++ parse GTF file
Popular Question 6 months ago, created a question with more than 1,000 views. For C++ parse GTF file
Popular Question 6 months ago, created a question with more than 1,000 views. For C++ parse GTF file
Popular Question 7 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Popular Question 7 months ago, created a question with more than 1,000 views. For Help: velvetg is trying allocate 2251799813685248 bytes
Commentator 11 months ago, created a comment with at least 3 up-votes. For C: Develop an R package for CRAN vs BioConductor
Centurion 12 months ago, created 100 posts.
Popular Question 14 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Popular Question 16 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Popular Question 16 months ago, created a question with more than 1,000 views. For Help: velvetg is trying allocate 2251799813685248 bytes
Popular Question 16 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Appreciated 17 months ago, created a post with more than 5 votes. For A: Develop an R package for CRAN vs BioConductor
Popular Question 17 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Popular Question 18 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Commentator 20 months ago, created a comment with at least 3 up-votes. For C: Develop an R package for CRAN vs BioConductor
Good Answer 20 months ago, created an answer that was upvoted at least 5 times. For A: Develop an R package for CRAN vs BioConductor
Appreciated 20 months ago, created a post with more than 5 votes. For A: Develop an R package for CRAN vs BioConductor
Scholar 20 months ago, created an answer that has been accepted. For A: How cuffcompare calculates sensitivity and specificity?
Teacher 20 months ago, created an answer with at least 3 up-votes. For A: Can'T Locate Vcf.Pm Vcftools
Popular Question 21 months ago, created a question with more than 1,000 views. For DESeq2 - "all gene-wise dispersion estimates are within 2 orders of magnitude"
Autobiographer 21 months ago, has more than 80 characters in the information field of the user's profile.
Popular Question 2.1 years ago, created a question with more than 1,000 views. For How to run velvet multithreaded?

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