User: E.Earley

gravatar for E.Earley
E.Earley20
Reputation:
20
Status:
New User
Location:
United States
Last seen:
3 days, 15 hours ago
Joined:
4 years, 11 months ago
Email:
e*******@gmail.com

Posts by E.Earley

<prev • 3 results • page 1 of 1 • next >
2
votes
2
answers
355
views
2
answers
Answer: A: Options for cell type deconvolution from whole blood?
... try their new CIBERSORTx https://doi.org/10.1038/s41587-019-0114-2 https://cibersortx.stanford.edu/ Also check out SCDC https://academic.oup.com/bib/advance-article/doi/10.1093/bib/bbz166/5699815 https://meichendong.github.io/SCDC/ ...
written 3 days ago by E.Earley20
0
votes
1
answer
1.4k
views
1
answer
Genome MuSiC calcRoiCovg crashing
... I'm having trouble getting calcRoiCovg to work on some paired exome alignments. I did get calcRoiCovg to finish completely and successfully on a test ROI file with 6 rows genome music bmr calc-covg --bam-list test_bam_input.tsv --output-dir test_genome_music_out/ --reference-sequence /opt/indexes ...
software error genome music written 4.9 years ago by E.Earley20 • updated 4.9 years ago by Cyriac Kandoth5.5k
0
votes
3
answers
3.4k
views
3
answers
Answer: A: Problems Running Bmr Calc-Covg On Music By Washu
... I got a similar error when certain ROI lines did not have an annotation column. For example, this test ROI works just fine: chr1 65831 65973 GENE But this ROI causes an error: chr1 65831 65973   genome music bmr calc-covg --bam-list test_bam_input.tsv --output-dir test_ ...
written 4.9 years ago by E.Earley20

Latest awards to E.Earley

Popular Question 20 months ago, created a question with more than 1,000 views. For Genome MuSiC calcRoiCovg crashing

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1170 users visited in the last hour