User: sluggishcrow

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Posts by sluggishcrow

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Comment: C: Mapping Uniprot To Ensembl Genes
... Solved my problem. thank you pierre! ...
written 6 weeks ago by sluggishcrow0
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Answer: A: How extract coordinates of surface atoms of a protein from a pdb file?
... Adding to what João Rodrigues mentioned there is another free program (non commercial use) called MSMS that given a set of spheres S and a probe radius rp ,computes the Reduced Surface and the analytical model of the Solvent Excluded Surface ( SES ).   ...
written 5.0 years ago by sluggishcrow0
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Comment: C: How extract coordinates of surface atoms of a protein from a pdb file?
... thank you but i said: "i dont mean the set of atoms of surface residues because that set may contain atoms that are deeply buried inside the protein." ...
written 5.0 years ago by sluggishcrow0
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How extract coordinates of surface atoms of a protein from a pdb file?
... Hi everyone, I have a pdb file that contains a single protein information. I want to extract the coordinates of the atoms that are on the surface of protein and by that i dont mean the set of atoms of surface residues because that set may contain atoms that are deeply buried inside the protein. I ...
pdb surface atom protein written 5.0 years ago by sluggishcrow0 • updated 5.0 years ago by a.polo88110

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Popular Question 5.0 years ago, created a question with more than 1,000 views. For How extract coordinates of surface atoms of a protein from a pdb file?
Scholar 5.0 years ago, created an answer that has been accepted. For A: How extract coordinates of surface atoms of a protein from a pdb file?

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