User: neokao

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neokao0
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Posts by neokao

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Comment: A: RNA-seq: Explain STAR quantMode geneCounts values
... Thanks for the clear explanations. If I need FPKM data, do I use these read counts ? ...
written 2.3 years ago by neokao0
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rnacocktail installation questions
... My lab typically does RNA-seq ~once a year and I do the bioinformatic analysis myself. So the annoying part for me being not the expert in routine NGS analysis from raw data, every time I get new RNA-seq raw data I almost have to redo the setup and software installation with some new (and maybe bett ...
software error rna-seq written 2.3 years ago by neokao0 • updated 22 months ago by sme.sahraeian0
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Using biomaRt in R to convert IDs in a big list with multiple columns.
... Hi, there, I have actually been using biomaRt in R to convert IDs. However I only know how to convert a single column of IDs. I've been looking for a way to convert one particular column of IDs to another kind of IDs in a big list with several other columns. Any suggestion will be appreciated. ...
biomart written 4.2 years ago by neokao0 • updated 4.2 years ago by Emily_Ensembl20k
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pheatmap row annotation and title font size questions
... I have been trying to add row annotation in my heatmap created by pheatmap in R. Basically I have a csv file with one particular column (Group) to be used for row annotation in heatmap. However, I'm having trouble with my following codes. The other two issues are: the font size of the title is appar ...
pheatmap heatmap written 4.7 years ago by neokao0

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Popular Question 4.2 years ago, created a question with more than 1,000 views. For pheatmap row annotation and title font size questions

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