User: Ahmetz

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Ahmetz60
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60
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New User
Location:
New york, NY
Last seen:
3 years ago
Joined:
7 years, 4 months ago
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a*********@gmail.com

Posts by Ahmetz

<prev • 3 results • page 1 of 1 • next >
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Answer: A: Identifying Genes That Express Different Isoforms In Cancer Vs Normal Rna-Seq Da
... Sahel, you should check you DEXseq package. It is made for detecting differential exon usage and has nice visualizations. ...
written 6.1 years ago by Ahmetz60
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Comment: C: Calculating Gene Densities From Rnaseq Data
... Thanks for the info, I'll check out IRanges. I want to do a similar plot to Fig2 of this paper: http://genome.cshlp.org/content/early/2011/05/02/gr.116335.110.long Each chromosome is plotted with expressed gene densities and RNAseq would give you that information as to whether a gene is present or n ...
written 7.4 years ago by Ahmetz60
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Calculating Gene Densities From Rnaseq Data
... Hi, Newbie here. I am interested plotting gene densities from my RNAseq data. I have a file with chromosome locations and read numbers for each gene. I want to plot each chromosome and get a bar graph with each bar indicating the number of genes present in 1MB bins. I guess I can count the number ...
rna visualization written 7.4 years ago by Ahmetz60 • updated 10 days ago by erdiazval30

Latest awards to Ahmetz

Popular Question 7.4 years ago, created a question with more than 1,000 views. For Calculating Gene Densities From Rnaseq Data
Student 7.4 years ago, asked a question with at least 3 up-votes. For Calculating Gene Densities From Rnaseq Data

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