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Comment: C: complex indel precludes detection of overlapping SNPs
7.2 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: bwa mem not aligning
7.2 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: complex indel precludes detection of overlapping SNPs
7.2 years ago by harold.smith.tarheel ★ 4.9k
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2.4k
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complex indel precludes detection of overlapping SNPs
variant-calling FreeBayes pooled sample
7.2 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Intersecting vcf files with bedtools
7.2 years ago by harold.smith.tarheel ★ 4.9k
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Answer: A: Intersecting vcf files with bedtools
7.2 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Which SNPs fall within genes and what's their description?
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Define unique intervals from a set of peaks
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Answer: A: How to clean bad tiles from Illumina reads?
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Training in Metagenomics Data Analysis @NIH, USA, Nov 7-10,2016
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Answer: A: known unmappable or poorly sequenced regions in hg38
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Explaining purpose of using FastQC to a colleague
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Extract specific reads from FASTQ files based on subsequence
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Explaining purpose of using FastQC to a colleague
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: Extracting 200bp flanking sequence around a snp using Bedtools
7.3 years ago by harold.smith.tarheel ★ 4.9k
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3.2k
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Answer: A: Remove reads from fastq file
7.3 years ago by harold.smith.tarheel ★ 4.9k
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3.2k
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Comment: C: Remove reads from fastq file
7.3 years ago by harold.smith.tarheel ★ 4.9k
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2.5k
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Answer: A: List of well-separated hg19 genes (bed)
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: How to call variants using BBMap, if possible with charts and graphics?
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Answer: A: New to all of this: Getting phred score from fast Q
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: finding the gene contain the snps ID
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: SnpEff Annotates the Same Effect on One Transcript Twice
7.3 years ago by harold.smith.tarheel ★ 4.9k
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4.5k
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Answer: A: SNP annotation using gff3
7.3 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: RNAseq read depth
7.4 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: retrieve complete gene sequence (exons and introns) from SNP name (rsid)
7.4 years ago by harold.smith.tarheel ★ 4.9k
1
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1
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3.6k
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Comment: C: RNAseq read depth
7.4 years ago by harold.smith.tarheel ★ 4.9k
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1
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2.7k
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Comment: C: retrieve complete gene sequence (exons and introns) from SNP name (rsid)
7.4 years ago by harold.smith.tarheel ★ 4.9k
1
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0
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2.7k
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Comment: C: retrieve complete gene sequence (exons and introns) from SNP name (rsid)
7.4 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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2.7k
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Answer: A: retrieve complete gene sequence (exons and introns) from SNP name (rsid)
7.4 years ago by harold.smith.tarheel ★ 4.9k
2
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1
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2.6k
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Comment: C: How common are Deletions and Indels?
7.4 years ago by harold.smith.tarheel ★ 4.9k
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Answer: A: Accounting for off-target reads
7.4 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: How to convincingly illustrate and discuss negative results in NGS.
7.4 years ago by harold.smith.tarheel ★ 4.9k
2
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1
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
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0
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33k
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
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0
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33k
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
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33k
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
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1
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33k
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
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0
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Comment: C: The Biostar Handbook. A bioinformatics e-book for beginners.
7.4 years ago by harold.smith.tarheel ★ 4.9k
3
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2
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
5
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33k
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Comment: C: Duplicates on Illumina
7.4 years ago by harold.smith.tarheel ★ 4.9k
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Comment: C: In YOUR personal opinion, who are the top 5 bioinformatics researchers in NGS in
7.4 years ago by harold.smith.tarheel ★ 4.9k
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1.1k
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Answer: A: what chipseq marker(s) we should use to study the effect of HDAC?
7.4 years ago by harold.smith.tarheel ★ 4.9k
4
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1
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9.3k
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Comment: C: In YOUR personal opinion, who are the top 5 bioinformatics researchers in NGS in
7.4 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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9.3k
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Comment: C: In YOUR personal opinion, who are the top 5 bioinformatics researchers in NGS in
7.4 years ago by harold.smith.tarheel ★ 4.9k
1
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1
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5.0k
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Comment: C: Example of how bioinformaticians can publish in Scientific Reports (by nature pu
7.4 years ago by harold.smith.tarheel ★ 4.9k
1
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Comment: C: bwa mem: which parameters to tune to improve alignment?
7.4 years ago by harold.smith.tarheel ★ 4.9k
0
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1
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6.1k
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Comment: C: bwa mem: which parameters to tune to improve alignment?
7.4 years ago by harold.smith.tarheel ★ 4.9k
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Answer: A: Trimmomatic for RNA-seq or Whole genome seuencing or for both?
7.4 years ago by harold.smith.tarheel ★ 4.9k
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1
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1.6k
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Answer: A: Algorithms for identification of insertion sites using split reads
7.4 years ago by harold.smith.tarheel ★ 4.9k
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1
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3.6k
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Comment: C: RNAseq read depth
7.4 years ago by harold.smith.tarheel ★ 4.9k
525 results • Page 4 of 11
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