User: voidnyx

gravatar for voidnyx
voidnyx10
Reputation:
10
Status:
New User
Location:
Germany
Last seen:
2 years, 10 months ago
Joined:
3 years, 9 months ago
Email:
v******@gmail.com

Posts by voidnyx

<prev • 3 results • page 1 of 1 • next >
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Maker output - Easy way to find actual gene names?
... Hi,   I was using the MAKER pipeline for gene prediction on my RNA-seq data and the pipeline worked fine. Now the output it generated is named like this: >maker-contig-dpp-500-500-exonerate_est2genome-gene-0.0-mRNA-3 protein AED:0.24 eAED:0.24 QI:184|1|1|1|0|0|3|1049|588   As you can see it ...
genome gene-prediction output maker written 3.3 years ago by voidnyx10 • updated 3.3 years ago by dandence0
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Running MAKER2 pipeline with Augustus for the first time -- need some guidance
... Hello all, I am currently working on a Chironomus genome draft and want to do some gene annotation. It's the first time I am doing this and I wanted to use the maker pipeline but I am struggling with how to use it correctly.   I wanted to use the pipeline with GeneMark and Augustus to have 2 diff ...
genome latest gene annotation augustus maker2 written 3.6 years ago by voidnyx10 • updated 5 months ago by Biostar ♦♦ 20
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Which Tools do you use for (Tandem) Repeat Detection? Why?
... Hi, I recently started my work for a university project where I want to analyze repetetive sequences in genomic DNA of two closely related species. I have no prior experience with this and have read some papers to start with. I found there are a handful of programs for Tandem Repeat detection like ...
genome tools tandem repeat repeat detection written 3.8 years ago by voidnyx10 • updated 3.6 years ago by Elke Schaper60

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