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Answer: Answer: How to count the same character in R
3.7 years ago by seidel 11k
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3.2k
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Comment: Comment: snakemake how to get or create wildcards from newly generated files
3.7 years ago by seidel 11k
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2.1k
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Answer: Answer: RPM in ChIP-seq analysis
3.7 years ago by seidel 11k
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965
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Answer: Answer: What is the principle of samtools depth？
3.7 years ago by seidel 11k
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1.3k
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Answer: Answer: are there some software to compute depth？
3.7 years ago by seidel 11k
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1.7k
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Comment: Comment: R ComplexHeatmap showing wrong output for for clustering columns
3.7 years ago by seidel 11k
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2.6k
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Comment: Comment: Reference genome
3.7 years ago by seidel 11k
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2.7k
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Answer: Answer: Change log2FoldChange range - plotMA
3.7 years ago by seidel 11k
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2.6k
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Answer: Answer: how to align paired and unpaired fastq files of a sample using STAR?
3.7 years ago by seidel 11k
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1.9k
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Comment: Comment: Why the most suitable UMAP PCs for my dataset is only Three?
3.7 years ago by seidel 11k
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1.1k
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Comment: Comment: RNA seq alignment
3.7 years ago by seidel 11k
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961
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Comment: Comment: gene function
3.7 years ago by seidel 11k
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1.5k
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Comment: Comment: cut off value of fpkm
3.7 years ago by seidel 11k
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1.6k
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Comment: Comment: enrichr
3.7 years ago by seidel 11k
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4.6k
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Answer: Answer: Not getting annotated colours in the row annotation in pheatmap
3.8 years ago by seidel 11k
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2.4k
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Comment: Comment: best platform to analysis chip-seq data using R
3.8 years ago by seidel 11k
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2.5k
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Answer: Answer: Telling apart control and treatment groups in Seurat Visualizations
3.8 years ago by seidel 11k
2
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1
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1.5k
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Comment: Comment: cut off value of fpkm
3.8 years ago by seidel 11k
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2.2k
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Answer: Answer: heatmap annotation
3.8 years ago by seidel 11k
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1.0k
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Comment: Comment: What is the best method for Differential Gene Expression analysis with log2 tran
3.8 years ago by seidel 11k
2
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1.3k
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Answer: Answer: Gene expression value
3.8 years ago by seidel 11k
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0
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785
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Comment: Comment: How do you read RNA-sequence analysis results?
3.8 years ago by seidel 11k
1
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1
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1.9k
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Answer: Answer: How to convert bedgraph file with bins into GRanges object?
3.8 years ago by seidel 11k
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1.1k
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Comment: Comment: Identity Percentage
3.8 years ago by seidel 11k
1
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3.5k
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Answer: Answer: Assigning row annotations to pheatmap
3.8 years ago by seidel 11k
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2.8k
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Comment: Comment: list.files in R
3.8 years ago by seidel 11k
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1
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1.2k
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Comment: Comment: RPKUM
3.8 years ago by seidel 11k
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1
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1.0k
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Comment: Comment: Bowtie2 scoring translated to number of non matching nt allowed
3.8 years ago by seidel 11k
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1
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1.8k
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Comment: Comment: Fold change vs Fold change plot
3.8 years ago by seidel 11k
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1.4k
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Answer: Answer: What does sequence-dependent mean?
3.8 years ago by seidel 11k
2
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1
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5.3k
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Answer: Answer: No color key in my heatmap with heatmap2.
3.8 years ago by seidel 11k
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1.8k
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Comment: Comment: Chipseq density plot between two grops of genes
3.8 years ago by seidel 11k
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1.6k
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Comment: Comment: RNA-seq profiling of S. cerevisiae fermentation
3.8 years ago by seidel 11k
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1
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1.6k
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Comment: Comment: RNA-seq profiling of S. cerevisiae fermentation
3.8 years ago by seidel 11k
3
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1
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1.2k
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Answer: Answer: Generating multiple heatmaps with heatmap3 and lapply
3.8 years ago by seidel 11k
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1.0k
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Comment: Comment: Correction of sequencing error using only Bowtie?
3.8 years ago by seidel 11k
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0
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754
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Comment: Comment: Genomics for Statisticians
3.8 years ago by seidel 11k
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1
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1.8k
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Comment: Comment: Extracting promotes from UCSC
3.8 years ago by seidel 11k
2
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0
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871
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Answer: Answer: Making a FASTA file from a segment of a DNA sequence
3.8 years ago by seidel 11k
0
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0
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1.6k
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Comment: Comment: How to determine the cut off threshold when removing the RNA-Seq with low varian
3.8 years ago by seidel 11k
1
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1
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1.9k
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Comment: Comment: bash if statement skipping python command
3.8 years ago by seidel 11k
2
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1
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2.2k
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Comment: Comment: How to determine whether a gene is NOT expressed in a given cell population
3.8 years ago by seidel 11k
0
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1
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1.9k
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Comment: Comment: bash if statement skipping python command
3.8 years ago by seidel 11k
1
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2.7k
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Comment: Comment: Generate DNA string
3.8 years ago by seidel 11k
0
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0
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2.5k
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Comment: Comment: KEGG pathway modules
3.8 years ago by seidel 11k
0
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1
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2.3k
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Comment: Comment: Header error while converting sam file to bam
3.8 years ago by seidel 11k
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0
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2.8k
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Comment: Comment: Using tabix to subset a region from a VCF file
3.8 years ago by seidel 11k
1
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0
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1.3k
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Comment: Comment: GOStats "genes being tested do not have corresponding GO terms"
3.8 years ago by seidel 11k
1
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0
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1.9k
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Answer: Answer: sam to bam then delete sam file
3.8 years ago by seidel 11k
0
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0
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883
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Answer: Answer: kegg pathway
3.8 years ago by seidel 11k
868 results • Page 7 of 18
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