User: yueli7

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yueli750
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China
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2 days ago
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4 years, 4 months ago
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Posts by yueli7

<prev • 111 results • page 1 of 12 • next >
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Comment: C: Seurat nFeature_RNA filter number in human
... Seurat allows you to easily explore QC metrics and filter cells based on any user-defined criteria. ...
written 2 days ago by yueli750
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Comment: C: Seurat nFeature_RNA filter number in human
... Hello, ATpoint, Thank you for your response! There is no suggestion in the tutorial: https://satijalab.org/seurat/v3.1/pbmc3k_tutorial.html best, Yue ...
written 5 days ago by yueli750
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Seurat nFeature_RNA filter number in human
... Hello, Anyone, This command in Seurat package means that : We filter cells that have over 2,500 or less than 200, >5% mitochondrial counts. If I worked on human, how many unique feature counts we have to filter? Thanks in advance for great help! Best, Yue pbmc <- subset(pbmc, subs ...
rna-seq written 5 days ago by yueli750
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Comment: C: question about seurat figure PC_heatmap
... Hello, jared.andrews07, Thank you so much for your response! Thank you again! Best, Yue ...
written 8 days ago by yueli750
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Comment: C: question ablout seurat figure PC_contribution
... Hello, Kevin Blighe, Thank you so much for your response! Thank you so much for your useful linkage. I really appreciated! Thank you again! Best, Yue ...
written 10 days ago by yueli750
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Comment: C: question ablout seurat figure PC_heatmap
... Hello, Medhat, Already change the title. Thank you! Best, Yue ...
written 11 days ago by yueli750
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question about seurat figure PC_heatmap
... Hello, Does anyone know what is the mean of the following figure? I know it is heatmap, what is the meaning of four blocks? It comes from a single-cell RNA-seq, Seurat package. Thanks in advance for any help! Best, Yue ...
rna-seq written 11 days ago by yueli750 • updated 10 days ago by jared.andrews073.9k
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question ablout seurat figure PC_contribution
... Hello, Anyone now what is the mean of following figure? I know it is the PC_1, what is the number in x-axis? It comes from single-cell RNA-seq Seurat package. Thanks in advance for any help! Best, Yue ![enter image description here][1] [1]: https://ibb.co/3k4KM2G ...
rna-seq written 11 days ago by yueli750 • updated 11 days ago by Kevin Blighe51k
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Comment: C: GSEA Must be finite.
... Just add 0.8 in each number (column or row). 0.8 is a pseudocount, just not let any number to be 0. ...
written 17 days ago by yueli750
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Comment: C: pseudocount of dataset
... Just add 0.8 in each number (column or row). 0.8 is a pseudocount, just not let any number to be 0. ...
written 17 days ago by yueli750

Latest awards to yueli7

Centurion 17 days ago, created 100 posts.
Popular Question 3 months ago, created a question with more than 1,000 views. For dependency plyr in R 2.15.1
Scholar 3 months ago, created an answer that has been accepted. For A: software to draw the picture
Supporter 4 months ago, voted at least 25 times.
Popular Question 14 months ago, created a question with more than 1,000 views. For DESeq pvalue>0.05 qvalue=1
Popular Question 14 months ago, created a question with more than 1,000 views. For dependency plyr in R 2.15.1
Popular Question 15 months ago, created a question with more than 1,000 views. For DESeq pvalue>0.05 qvalue=1
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Popular Question 4.3 years ago, created a question with more than 1,000 views. For install qvalue in R

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