User: Amos

gravatar for Amos
Amos40
Reputation:
40
Status:
New User
Location:
European Union
Last seen:
4 years, 9 months ago
Joined:
8 years, 7 months ago
Email:
a**********@gmail.com

Posts by Amos

<prev • 5 results • page 1 of 1 • next >
2
votes
5
answers
3.3k
views
5
answers
Answer: A: Docker - one image to rule them all?
... Hi Manuel, Putting everything in one container, is one option, but I think there are distinct limitations here i.e. limitation on reuse & size of the image. The docker maxim is one "concern per container", and think this works well in this context. And as redundant layers are essentially re-use ...
written 4.8 years ago by Amos40
1
vote
13
answers
23k
views
13
answers
Answer: A: Data Too Big To Be Stored In Memory: Common Options
... SciDB might be an alternative, it is designed for some fairly cool in-database computation. It has API's for R and Python. ...
written 5.9 years ago by Amos40
0
votes
6
answers
11k
views
6
answers
Answer: A: Which Type Of Database Systems Are More Appropriate For Storing Information Extr
... My general inclination has been to follow the same workflow ih3 suggests in the accepted answer, but I stumbled on this recently and was looking around to see if anyone tried the SciDB (fast selects, in-database calc). There is a VCF loader available here https://github.com/slottad/scidb-genotypes ...
written 5.9 years ago by Amos40
0
votes
21
answers
100k
views
21
answers
Answer: A: Is There A Free Alternative To Ingenuity Pathway Analysis?
... Try Hanaylzer. There is a nice vid here showing it's use. http://hanalyzer.sourceforge.net/ ...
written 6.3 years ago by Amos40
1
vote
5
answers
28k
views
5
answers
Comment: A: Dbsnp : Best Way To Obtain Data On Snps
... Try Annovar http://www.openbioinformatics.org/annovar/ is quite a powerful Variant annotation tool. ...
written 6.3 years ago by Amos40

Latest awards to Amos

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1643 users visited in the last hour