User: akhilvbioinfo

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akhilvbioinfo130
Reputation:
130
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Location:
India, chennai
Last seen:
2 weeks, 4 days ago
Joined:
3 years, 6 months ago
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Posts by akhilvbioinfo

<prev • 88 results • page 1 of 9 • next >
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Job: Senior Scientific Officer
... SRMIST invites applications for the following position to work in the above mentioned project: Senior Scientific Officer – 1 No. Essential Qualification:M.Sc / M.Tech in Life Sciences with a minimum of 5 years work experience in molecular biology techniques such as qPCR, Bioplex and Microarray. S ...
digitalpcr bioplex job qpcr pcr written 10 weeks ago by akhilvbioinfo130 • updated 9 weeks ago by WouterDeCoster36k
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Comment: C: Cannot Install Latest Version Of Deseq
... You can install DESeq via Bioconda using this command conda install bioconductor-deseq2 ...
written 4 months ago by akhilvbioinfo130 • updated 4 months ago by RamRS20k
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Pan and core Genome prediction from OrthoMCL output
... Hai biostars I did Orthomcl clustering with 7 genome and i got more than 9000 clusters. How will i find Pan,core Genome and unique genes from OrthoMCL output. Is there any scripts or tool for this ? ...
core genome pangenome orthomcl mcl written 2.1 years ago by akhilvbioinfo130 • updated 2.1 years ago by jrj.healey10k
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Comment: C: SNP frequencies in Fasta Alignment
... Is there any programmes or tool to calculate this ...
written 2.1 years ago by akhilvbioinfo130
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Comment: C: SNP frequencies in Fasta Alignment
... i aligned 20 genes (fasta format) using MAFFT and i want to find gene variation respect to snp/snp frequencies ...
written 2.1 years ago by akhilvbioinfo130
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SNP frequencies in Fasta Alignment
... Hai everyone I have a set of fasta aligned file from this alignment file how i will get snps and its frequencies ...
fasta alignment snp written 2.1 years ago by akhilvbioinfo130 • updated 2.1 years ago by Fabio Marroni2.1k
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Comment: C: extract same all similar sequences in FASTA based on the header
... I changed headers using this comment ( Seq tool kit wont accept "/" characters) sed -i -e 's/\//\-/g'seqs.fna Now its working perfectly Thank you ...
written 2.2 years ago by akhilvbioinfo130
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Comment: C: extract same all similar sequences in FASTA based on the header
... its very simple sir but i got an error like this [ERRO] open seqs.fna.split/seqs.id_ketopantoate reductase PanE/ApbA family protein.fna: no such file or directory ...
written 2.2 years ago by akhilvbioinfo130
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Comment: C: extract same all similar sequences in FASTA based on the header
... awk -F "|" '/^>/ {F = $3".fasta"} {print > F}' input.fasta>out.fasta ...
written 2.2 years ago by akhilvbioinfo130
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Comment: C: extract same all similar sequences in FASTA based on the header
... Yah i tried with AWK but its not working properly ...
written 2.2 years ago by akhilvbioinfo130

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Popular Question 7 weeks ago, created a question with more than 1,000 views. For concatenate sequences in a fasta file
Popular Question 8 weeks ago, created a question with more than 1,000 views. For concatenate sequences in a fasta file
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Great Question 15 months ago, created a question with more than 5,000 views. For nr- protein database
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Epic Question 15 months ago, created a question with more than 10,000 views. For nr- protein database
Popular Question 15 months ago, created a question with more than 1,000 views. For concatenate sequences in a fasta file
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Popular Question 15 months ago, created a question with more than 1,000 views. For extract predicted gene sequences from gilmmer output
Student 15 months ago, asked a question with at least 3 up-votes. For nr- protein database
Popular Question 15 months ago, created a question with more than 1,000 views. For concatenate sequences in a fasta file
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Popular Question 24 months ago, created a question with more than 1,000 views. For How to unzip all genomic.fna.gz in single command
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