User: Maximilian Haeussler

Reputation:
1,270
Status:
Trusted
Location:
UCSC
Website:
http://genome.ucsc.edu/
Last seen:
1 month, 3 weeks ago
Joined:
7 years, 4 months ago
Email:
m**********@gmail.com

Posts by Maximilian Haeussler

<prev • 99 results • page 1 of 10 • next >
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Comment: C: UCSC MySQL query to find gene symbols for all RefSeq IDs?
... If you have RefSeq IDs to map to something else, I would use the NCBI efetch tools, as Pierre Lindenbaum suggests above. I would never use a third party webservice for a pipeline you want to run again. ...
written 11 weeks ago by Maximilian Haeussler1.3k
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Comment: C: Running Bowtie As Service Or Daemon?
... On our server, Centos 6.8, the -shmem option hangs. I got around that by putting the index into /dev/shm and using --mm, which should be the same thing. ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Running Bowtie As Service Or Daemon?
... In a more current bowtie2 version, this exists now. ...
written 6 months ago by Maximilian Haeussler1.3k
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Answer: A: BWA shm index preloading: only for BWA MEM?
... I read over the BWA source code and figured that yes, only "bwa mem" can use the mmaped index, "bwa aln" cannot. bowtie1 and bowtie2 both can use the mmap'ed index. Note that there is a github issue in the bwa repo on github where users report a 25% performance drop when using this option, so YMMY. ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Is there an open version of f1000
... Argh!! I was confused, sorry. Yes, I meant F1000prime. I wonder if many of their customers understand the difference between their products... ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Is there an open version of f1000
... He already did that, just look a few lines above your own comment. Otherwise here: https://f1000research.com/browse/f1000-faculty-reviews ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Is there an open version of f1000
... Yes, but @Wouter linked to the open reviews of open access papers published in the F1000 journal. I was referring to the F1000 Faculty Reviews website of articles published in other articles. ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Is there an open version of f1000
... Yes, that is the website with reviews of articles that have been already published by someone else. ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Is there an open version of f1000
... Yes, but @Wouter linked to the open reviews of open access papers published in the F1000 journal. I was referring to the F1000 Faculty Reviews, website with reviews of articles published in any journal. ...
written 6 months ago by Maximilian Haeussler1.3k
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Comment: C: Is there an open version of f1000
... Yes, this is the website I was referring to. ...
written 6 months ago by Maximilian Haeussler1.3k

Latest awards to Maximilian Haeussler

Appreciated 6 months ago, created a post with more than 5 votes. For A: Drawing Chromosome Ideogams With Data
Supporter 7 months ago, voted at least 25 times.
Appreciated 22 months ago, created a post with more than 5 votes. For A: Drawing Chromosome Ideogams With Data
Teacher 23 months ago, created an answer with at least 3 up-votes. For A: Drawing Chromosome Ideogams With Data
Scholar 2.1 years ago, created an answer that has been accepted. For A: UCSC BedGraph Issue
Scholar 3.0 years ago, created an answer that has been accepted. For A: UCSC BedGraph Issue
Teacher 3.0 years ago, created an answer with at least 3 up-votes. For A: Drawing Chromosome Ideogams With Data
Scholar 3.2 years ago, created an answer that has been accepted. For A: UCSC BedGraph Issue
Popular Question 3.3 years ago, created a question with more than 1,000 views. For View Protein Domain Annotation On Multiple Alignment?
Guru 3.3 years ago, received more than 100 upvotes.
Scholar 3.3 years ago, created an answer that has been accepted. For A: UCSC BedGraph Issue
Appreciated 3.9 years ago, created a post with more than 5 votes. For A: Drawing Chromosome Ideogams With Data
Appreciated 4.0 years ago, created a post with more than 5 votes. For A: Drawing Chromosome Ideogams With Data
Good Answer 4.0 years ago, created an answer that was upvoted at least 5 times. For A: Getting Ucsc Data Via Mysql
Appreciated 4.6 years ago, created a post with more than 5 votes. For A: Drawing Chromosome Ideogams With Data
Appreciated 4.6 years ago, created a post with more than 5 votes. For A: Find All Genbank Submissions Associated With An Article Publication In 2005
Appreciated 4.6 years ago, created a post with more than 5 votes. For A: Is There Such A Thing As A Ucsc Api?
Appreciated 4.6 years ago, created a post with more than 5 votes. For A: Getting Ucsc Data Via Mysql
Appreciated 4.6 years ago, created a post with more than 5 votes. For A: Downloading Fasta Files
Appreciated 4.6 years ago, created a post with more than 5 votes. For A: Ngs Data Centers: Storage, Backup, Hardware Etc..
Good Answer 4.6 years ago, created an answer that was upvoted at least 5 times. For A: Is There Such A Thing As A Ucsc Api?
Good Answer 4.6 years ago, created an answer that was upvoted at least 5 times. For A: Getting Ucsc Data Via Mysql
Good Answer 4.6 years ago, created an answer that was upvoted at least 5 times. For A: Ngs Data Centers: Storage, Backup, Hardware Etc..
Teacher 4.6 years ago, created an answer with at least 3 up-votes. For A: Drawing Chromosome Ideogams With Data
Teacher 4.6 years ago, created an answer with at least 3 up-votes. For A: Does Ec2 Have Fast And Cheap Shared File Systems?

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