Moderator: cpad0112

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cpad011214k
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Posts by cpad0112

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Comment: C: Removing a DOT after each sequence
... try `seqkit replace -sp "\." -r "" test.fa` and `grep -v "\." test.fa` on OP fasta sequences. ...
written 2 hours ago by cpad011214k
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Answer: C: extract a DNA sequence based on header in multifasta file
... Try: $ awk '$0 ~ /^>16S_rRNA/ {getline seq; print $0,seq}' test.fa $ sed -n '/^>16S_rRNA/{N;p}' test.fa **don't** use `sed -i` ...
written 1 day ago by cpad011214k
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Comment: C: fasta file extraction
... what is the basis of pairing from OP example? Number of lines before -- ? https://www.biostars.org/u/5268/. $ awk -v RS="--" -v ORS="--" 'NF>3 {print}' test.fa test_MAPQ.fasta->chr10:146793-146943 test_MAPQ.fasta:gccAAATCATTACTTTTGAAGAAATAGTTAACAATGATTATTTCTTTTTGAATGACaataa ...
written 2 days ago by cpad011214k
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Comment: C: Scientific Programmer, Seville Spain
... For interested candidates, address to communicate is david.hidalgo@bms.com and the role is based in Seville, Spain. Opportunity is open for applications from anywhere. ...
written 2 days ago by cpad011214k
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Comment: C: Scientific Data Manager (Seville, Spain)
... For interested candidates, address to communicate is david.hidalgo@bms.com and the role is based in Seville, Spain. Opportunity is open for applications from anywhere. ...
written 2 days ago by cpad011214k
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Comment: C: Research Scientist, Computational Biology Methods (Seville, Spain)
... For interested candidates, address to communicate is david.hidalgo@bms.com and the role is based in Seville, Spain. Opportunity is open for applications from anywhere. ...
written 2 days ago by cpad011214k
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Comment: C: Research Scientist, Molecular Interactions (Seville, Spain)
... Thank you ...
written 2 days ago by cpad011214k
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Comment: C: Research Scientist, Molecular Interactions
... Please furnish email ID to communicate and post if this is an international opportunity. ...
written 2 days ago by cpad011214k
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Comment: C: R - How to convert a sequence in a fasta file into a matrix
... You should have tried https://www.biostars.org/u/78880/ 's solution. It's easy to understand ...
written 3 days ago by cpad011214k
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Comment: C: R - How to convert a sequence in a fasta file into a matrix
... ? If it's an exercise, are you not supposed to work on it, by your self? At least you should have tagged it as exercise. ...
written 4 days ago by cpad011214k

Latest awards to cpad0112

Good Answer 2 days ago, created an answer that was upvoted at least 5 times. For C: geom_bar plot with several variables
Teacher 10 days ago, created an answer with at least 3 up-votes. For A: Finding the iIllumina index read from raw fastq file
Teacher 10 days ago, created an answer with at least 3 up-votes. For A: Finding the iIllumina index read from raw fastq file
Scholar 19 days ago, created an answer that has been accepted. For A: .fai file generation for a vcf file containing snps
Good Answer 7 weeks ago, created an answer that was upvoted at least 5 times. For C: Metagenomic Data management
Teacher 8 weeks ago, created an answer with at least 3 up-votes. For A: Finding the iIllumina index read from raw fastq file
Good Answer 9 weeks ago, created an answer that was upvoted at least 5 times. For C: Metagenomic Data management
Scholar 9 weeks ago, created an answer that has been accepted. For A: .fai file generation for a vcf file containing snps
Appreciated 9 weeks ago, created a post with more than 5 votes. For C: can someone read this result to me
Teacher 9 weeks ago, created an answer with at least 3 up-votes. For A: Finding the iIllumina index read from raw fastq file
Commentator 9 weeks ago, created a comment with at least 3 up-votes. For C: Problem installing Rgraphviz in R
Scholar 10 weeks ago, created an answer that has been accepted. For A: .fai file generation for a vcf file containing snps
Appreciated 12 weeks ago, created a post with more than 5 votes. For C: can someone read this result to me
Appreciated 3 months ago, created a post with more than 5 votes. For C: can someone read this result to me
Scholar 3 months ago, created an answer that has been accepted. For A: .fai file generation for a vcf file containing snps
Appreciated 3 months ago, created a post with more than 5 votes. For A: Analysis past the differentially expressed genes: RNAseq
Scholar 3 months ago, created an answer that has been accepted. For A: .fai file generation for a vcf file containing snps
Appreciated 3 months ago, created a post with more than 5 votes. For A: Analysis past the differentially expressed genes: RNAseq
Appreciated 4 months ago, created a post with more than 5 votes. For A: Analysis past the differentially expressed genes: RNAseq
Commentator 4 months ago, created a comment with at least 3 up-votes. For C: Problem installing Rgraphviz in R
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: convert SNP calls to amino acid change
Commentator 4 months ago, created a comment with at least 3 up-votes. For C: Problem installing Rgraphviz in R
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: convert SNP calls to amino acid change
Scholar 4 months ago, created an answer that has been accepted. For A: .fai file generation for a vcf file containing snps
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: convert SNP calls to amino acid change

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