User: the_smiao

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the_smiao0
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Posts by the_smiao

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Answer: A: Strategy for processing ancient DNA
... Hi @Ghani, Don't use HaplotypeCaller with aDNA, ti is optimized and designed to process 30X + datasets. You can experiment with HaplotypeCaller, however, with less than 1X on average, stick with calling pseudo-haploids using random draw. You simply can't call reliably diploid calls, and lowering th ...
written 10 weeks ago by the_smiao0
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Comment: C: Tool for random access to indexed BAM files in S3?
... Can you please describe what you have done, it would be very helpful. ...
written 2.1 years ago by the_smiao0

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