User: Lazarus

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Lazarus130
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130
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Finland
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1 week ago
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1 year, 4 months ago
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Posts by Lazarus

<prev • 45 results • page 1 of 5 • next >
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Methods for Identifying Hammerhead Ribozymes?
... I am planning to start a work on a project for identification of hammerhead ribozymes, but given that I am only a Master's degree student and that not much research been done into hammerheads, I am not quite sure whether this project is realistic in a 6-month period. Is it really an extremely compli ...
rna ribozyme written 8 days ago by Lazarus130
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Answer: A: Comparing contigs results from two different assembler
... I ended up using progressiveMauve, MUMmer (specifically MUMmerplots), QUAST, and clc_sequence_info (from CLC Genomics Workbench) altogether and I could come to some conclusions based on the results of all these methods. ...
written 3 months ago by Lazarus130
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How relevant, valuable, and important is Information Visualization nowadays in Bioinformatics?
... I find Information Visualization extremely interesting, and it was through a PhD-level course I took during my Master's studies that I came to realize how many terrible plots any scientific journal/article contains on a regular basis. I can clearly see that there is a potential for a vast number of ...
information visualization infovis job written 3 months ago by Lazarus130 • updated 3 months ago by Carlo Yague2.2k
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Non-Bioinformatics Jobs with a Bioinformatics Degree
... What are some non-Bioinformatics jobs one can easily get/apply for with a degree in Bioinformatics? I have heard from some people that jobs that require statisticians and data analysts (even in the economic market) usually do not have problems with taking in Bioinformaticians. How true is this? And ...
job written 4 months ago by Lazarus130 • updated 4 months ago by genomax222k
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Measuring Drug Resistance Guidelines and Experimental Design?
... I want to design an experiment that measures acquired drug resistance and I need few guidelines. What is the general way to do this? Particularly speaking this is for cancer treatment and I want to find out if a particular drug is causing acquired resistance after a period of treatment. I need few ...
drug resistance written 7 months ago by Lazarus130
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Comment: C: Solving ODE Using Derivative with Respect to Time in R -- Drug Response Modellin
... Each equation is for a different cell. Therefore, m[1], m[2], m[3], and m[4] all have different steady states. ...
written 8 months ago by Lazarus130
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Solving ODE Using Derivative with Respect to Time in R -- Drug Response Modelling
... I am trying to solve the following system in R, using `ode23` (`pracma` package). The model I am trying to solve: http://i.stack.imgur.com/EY0x6.png I have these initial values and want to run the model for **400 days**: d0 = 0.003, d1 = 0.008, d2 = 0.05, d3 = 1, ry = 0.0 ...
R written 8 months ago by Lazarus130
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Answer: A: How to model transcriptional networks from gene expression time-course data
... I was finally successful to do this using both of the following approaches, I found the first one to be easier to work with: 1. Äijö T., Lähdesmäki H. (2009) Learning gene regulatory networks from gene expression measurements using non-parametric molecular kinetics. Bioinformatics, 25, 293 ...
written 8 months ago by Lazarus130
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Comment: C: Perturbed vs. Unperturbed Models
... Thanks. So as I can see, it is not really a biological notion that has a generalized meaning everywhere! ...
written 8 months ago by Lazarus130
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Perturbed vs. Unperturbed Models
... What is the difference between perturbed and unperturbed tumor growth models? I am trying to understand this paper: http://cancerres.aacrjournals.org/cgi/pmidlookup?view=long&pmid=14871843 ...
model written 8 months ago by Lazarus130

Latest awards to Lazarus

Supporter 3 months ago, voted at least 25 times.
Scholar 8 months ago, created an answer that has been accepted. For A: How to model transcriptional networks from gene expression time-course data

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