User: E

gravatar for E
E150
Reputation:
150
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Tuvalu
Last seen:
1 month, 2 weeks ago
Joined:
1 year, 7 months ago
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Posts by E

<prev • 42 results • page 1 of 5 • next >
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How to search for a ribozyme present on two RNA molecules at the same time? (enzyme strand on one RNA molecule and the substrate on another)
... Is it possible to search for a particular ribozyme (consisting of a 'substrate' and 'enzyme' strand) present on two different RNA molecules? That is to say, search for a case where the substrate strand is present on one RNA molecule and the enzyme strand is present on a different RNA molecule. I am ...
rnabob patscan rnamotif rna ribozyme written 7 weeks ago by E150
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Answer: A: Comparing contigs results from two different assembler
... I ended up using progressiveMauve, MUMmer (specifically MUMmerplots), QUAST, and clc_sequence_info (from CLC Genomics Workbench) altogether and I could come to some conclusions based on the results of all these methods. ...
written 6 months ago by E150
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How relevant, valuable, and important is Information Visualization nowadays in Bioinformatics?
... I find Information Visualization extremely interesting, and it was through a PhD-level course I took during my Master's studies that I came to realize how many terrible plots any scientific journal/article contains on a regular basis. I can clearly see that there is a potential for a vast number of ...
information visualization infovis job written 6 months ago by E150 • updated 6 months ago by Carlo Yague2.9k
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Non-Bioinformatics Jobs with a Bioinformatics Degree
... What are some non-Bioinformatics jobs one can easily get/apply for with a degree in Bioinformatics? I have heard from some people that jobs that require statisticians and data analysts (even in the economic market) usually do not have problems with taking in Bioinformaticians. How true is this? And ...
job written 6 months ago by E150 • updated 6 months ago by genomax27k
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Comment: C: Solving ODE Using Derivative with Respect to Time in R -- Drug Response Modellin
... Each equation is for a different cell. Therefore, m[1], m[2], m[3], and m[4] all have different steady states. ...
written 11 months ago by E150
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Answer: A: How to model transcriptional networks from gene expression time-course data
... I was finally successful to do this using both of the following approaches, I found the first one to be easier to work with: 1. Äijö T., Lähdesmäki H. (2009) Learning gene regulatory networks from gene expression measurements using non-parametric molecular kinetics. Bioinformatics, 25, 293 ...
written 11 months ago by E150
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Comment: C: Perturbed vs. Unperturbed Models
... Thanks. So as I can see, it is not really a biological notion that has a generalized meaning everywhere! ...
written 11 months ago by E150
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Perturbed vs. Unperturbed Models
... What is the difference between perturbed and unperturbed tumor growth models? I am trying to understand this paper: http://cancerres.aacrjournals.org/cgi/pmidlookup?view=long&pmid=14871843 ...
model written 11 months ago by E150
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Comment: C: Understanding Kernel Ridge Regression for Drug-Target Interaction
... @Learner: Which of the data tables are you specifically referring to? Do you mean the first one containing drugs and proteins and their binding affinities? If so, then that one was taken directly from an experimental study's dataset (Metz et. al (2013)). But if you are referring to protein-protein s ...
written 12 months ago by E150
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Training and/or Master's Thesis at EMBL Heidelberg
... Does anyone have any information or experience with EMBL (preferably in Heidelberg) for doing Master's thesis or internship/training for 5-6 months? I know that such positions at EMBL are completely unpaid and that's totally fine. I only wonder how hard it is to get accepted there and whether they h ...
embl written 12 months ago by E150 • updated 12 months ago by Jean-Karim Heriche9.9k

Latest awards to E

Supporter 6 months ago, voted at least 25 times.
Scholar 11 months ago, created an answer that has been accepted. For A: How to model transcriptional networks from gene expression time-course data

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