User: sharmatina189059

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United States
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Posts by sharmatina189059

<prev • 67 results • page 1 of 7 • next >
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Comment: C: creating a heatmap with R and retrieve cluster data from dendogram
... Please tell me how to upload pic in this forum ...
written 3 days ago by sharmatina18905910
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creating a heatmap with R and retrieve cluster data from dendogram
... Dear all I have drug resistance profile of 100 bacterial genomes. The data is like Antibiotic name ab1 ab2 ab3 ab4 ab5 genome1 S R S R S genome2 R S S R genome3 R S S R I want to generate a R plot. the code for generating a R plot is like: data <- read.csv("/Users/apple/D ...
R written 3 days ago by sharmatina18905910 • updated 2 days ago by EagleEye4.8k
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Comment: C: Problem for adding foreign key
... Yes. You are right. I have to ask this question using stack overflow. ...
written 4 weeks ago by sharmatina18905910
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(Closed) Problem for adding foreign key
... Deal all Can anyone tell me the problem with this command. mysql> ALTER TABLE Biocyc_2 ADD CONSTRAINT fk_col FOREIGN KEY (User_ids) REFERENCES Unique_reaction (User_ids) on DELETE CASADE ON UPDATE RESTRICT; It is showing this error. ERROR 1064 (42000): You have an error in your SQL syntax; che ...
mysql written 4 weeks ago by sharmatina18905910
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Retrieving biochemical reaction using a list of EC numbers .
... Dear all I am being indulge in constructing metabolic network reconstruction of a bacterial genome. where I have annotated the bacterial genome and retrieve a list of EC numbers. I need to get corresponding reactions of these EC numbers which should be organism specific. Since each EC number may ca ...
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Comment: C: Retrieving Reactions from EC number in BiGG Model
... I have list of EC numbers and I want associated reaction. For this purpose I have mapped protein ids of all ec numbers to uniprot ids of same organism. The results are like one EC number has multiple uniprot ids. Is this a correct way to retrieve reactions. How to map multiple uniprot ids to my orga ...
written 4 weeks ago by sharmatina18905910
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Comment: C: EC file parsing
... ENTRY NAME CLASS EC 1.1.1.35 3-hydroxyacyl-CoA dehydrogenase; Oxidoreductases;Acting on the CH-OH group of donors; With NAD+ or NADP+ as acceptor Acting on the CH-OH group of donors; With NAD+ or NADP+ as acceptor ...
written 5 weeks ago by sharmatina18905910
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Comment: C: EC file parsing
... It prints only single line output..I need multi-line output. ...
written 5 weeks ago by sharmatina18905910
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Answer: A: EC file parsing
... Is there a way to retrieve substrate , Product, enzyme class and interacting pathway using KEGG API and script if you have multiple number of EC numbers and Reaction number from KEGG. EC 1.1.1.35 EC 1.1.1.100 and so on and rn:R1135 rn:R05233 ...
written 5 weeks ago by sharmatina18905910
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Comment: C: EC file parsing
... Thanks for your help.. ...
written 5 weeks ago by sharmatina18905910

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