User: najibveto

gravatar for najibveto
najibveto30
Reputation:
30
Status:
New User
Location:
Korea, Republic Of
Last seen:
1 week, 2 days ago
Joined:
2 years ago
Email:
n********@gmail.com

Posts by najibveto

<prev • 40 results • page 1 of 4 • next >
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Comment: C: extraction upstream sequence of precursor microrna
... thanks a lot for your help, however i didn't use bedtools before and also is it possible to blast and extract using bedtools? because the microrna are new in Atlantic salmon. ...
written 9 weeks ago by najibveto30
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extraction upstream sequence of precursor microrna
... hello i have several microrna with their mature sequences, it is from atlantic salmon and i need to get the precursor sequence for each microrna also i need the upstream sequence of 1000 not for each precursor to study possible binding sites for promoter studies. the atlantic salmon have a genome a ...
upstream precu microrna precursor written 9 weeks ago by najibveto30 • updated 9 weeks ago by shoujun.gu260
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
... thanks a lot for this amazing book and i am enjoying reading the online version. i want to know if possible to add some chapter such as : - study of microrna-seq in model and non model organism. - study of RNA-seq in non model organism. ...
written 10 weeks ago by najibveto30
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Comment: C: Someone has experience with KNIFE software for circRNA detection?
... thanks a lot for your help. ...
written 7 months ago by najibveto30
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Someone has experience with KNIFE software for circRNA detection?
... I am getting troubles to run KNIFE in my Linux box. Here is the command and the output of the system. Someone has experienced such kind of error?. Thanks in advance. COMMAND: ./completeRun.sh /home/fenguita/work/Nuno_FA_circRNAs/raw/ complete /home/fenguita/work/Nuno_FA_circRNAs/results/ output 8 ...
knife circrna rna-seq written 7 months ago by najibveto30
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Comment: C: remove dubplicate from ensemble seqeunce?
... i understand now. thanks for your explanation and sorry for my late reply. ...
written 7 months ago by najibveto30
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get the 3utr of gene using transcriptome and genome
... hello i am working on fish called fathead minnow and by looking in NCBI found the genome assembly and the transcriptome assembly pf this fish, plus the closed relative to it is the zebrafish. i have one gene of interest called the TP53i11, the zebrafish have it and i need to know the sequence of it ...
genome gene transciptome 3utr written 9 months ago by najibveto30 • updated 9 months ago by Biostar ♦♦ 20
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Comment: A: How to download all the parasite protein data from NCBI?
... thanks a lot for your help. ...
written 10 months ago by najibveto30
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How to download all the parasite protein data from NCBI?
... I want to do a local blast using all the bacterial protein data from NCBI instead of NR. Is there any way to download all the data from NCBI? Or to filter the NR database locally? ...
ncbi parasite protein written 10 months ago by najibveto30
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Comment: C: remove dubplicate from ensemble seqeunce?
... thanks for your help. i will do as you suggested ...
written 10 months ago by najibveto30

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