User: najibveto

gravatar for najibveto
najibveto30
Reputation:
30
Status:
New User
Location:
Korea, Republic Of
Last seen:
1 month, 4 weeks ago
Joined:
2 years, 8 months ago
Email:
n********@gmail.com

Posts by najibveto

<prev • 43 results • page 1 of 5 • next >
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Comment: C: bacteriophage genome assembly
... thanks a lot for your advice and sorry for my late reply. should I map the reads to my host bacteria genome or should I download all the bacterial genomes? is there a tutorial for phage assembly or software to do the assembly. thanks a lot. ...
written 9 weeks ago by najibveto30
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Comment: C: bacteriophage genome assembly
... thanks a lot. we used illumina for sequencing. ...
written 9 weeks ago by najibveto30
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bacteriophage genome assembly
... hello i am working on new bacteriophage i isolated from a bacteria. so i extracted the DNA from bacteriophage after isolation of the later using cesium gradient. i checked the DNA on electrophoresis and i get a size of genome around 17 kb. i send the dna to company and sequenced the genome. i got t ...
bacteriophage genome de novo assembly written 4 months ago by najibveto30 • updated 4 months ago by Buffo1.1k
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Comment: C: extraction upstream sequence of precursor microrna
... thanks a lot for your help, however i didn't use bedtools before and also is it possible to blast and extract using bedtools? because the microrna are new in Atlantic salmon. ...
written 10 months ago by najibveto30
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extraction upstream sequence of precursor microrna
... hello i have several microrna with their mature sequences, it is from atlantic salmon and i need to get the precursor sequence for each microrna also i need the upstream sequence of 1000 not for each precursor to study possible binding sites for promoter studies. the atlantic salmon have a genome a ...
upstream precu microrna precursor written 10 months ago by najibveto30 • updated 10 months ago by shoujun.gu340
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Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
... thanks a lot for this amazing book and i am enjoying reading the online version. i want to know if possible to add some chapter such as : - study of microrna-seq in model and non model organism. - study of RNA-seq in non model organism. ...
written 10 months ago by najibveto30
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Comment: C: Someone has experience with KNIFE software for circRNA detection?
... thanks a lot for your help. ...
written 15 months ago by najibveto30
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Someone has experience with KNIFE software for circRNA detection?
... I am getting troubles to run KNIFE in my Linux box. Here is the command and the output of the system. Someone has experienced such kind of error?. Thanks in advance. COMMAND: ./completeRun.sh /home/fenguita/work/Nuno_FA_circRNAs/raw/ complete /home/fenguita/work/Nuno_FA_circRNAs/results/ outpu ...
knife circrna rna-seq written 15 months ago by najibveto30 • updated 9 weeks ago by WouterDeCoster30k
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Comment: C: remove dubplicate from ensemble seqeunce?
... i understand now. thanks for your explanation and sorry for my late reply. ...
written 16 months ago by najibveto30
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get the 3utr of gene using transcriptome and genome
... hello i am working on fish called fathead minnow and by looking in NCBI found the genome assembly and the transcriptome assembly pf this fish, plus the closed relative to it is the zebrafish. i have one gene of interest called the TP53i11, the zebrafish have it and i need to know the sequence of it ...
genome gene transciptome 3utr written 17 months ago by najibveto30 • updated 17 months ago by Biostar ♦♦ 20

Latest awards to najibveto

Popular Question 9 weeks ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file
Popular Question 7 months ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file
Popular Question 7 months ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file

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