User: najibveto

gravatar for najibveto
najibveto30
Reputation:
30
Status:
New User
Location:
Korea, Republic Of
Last seen:
5 months, 1 week ago
Joined:
3 years, 5 months ago
Email:
n********@gmail.com

Posts by najibveto

<prev • 43 results • page 1 of 5 • next >
0
votes
1
answer
547
views
1
answers
Comment: C: bacteriophage genome assembly
... thanks a lot for your advice and sorry for my late reply. should I map the reads to my host bacteria genome or should I download all the bacterial genomes? is there a tutorial for phage assembly or software to do the assembly. thanks a lot. ...
written 11 months ago by najibveto30
0
votes
1
answer
547
views
1
answers
Comment: C: bacteriophage genome assembly
... thanks a lot. we used illumina for sequencing. ...
written 11 months ago by najibveto30
0
votes
1
answer
547
views
1
answer
bacteriophage genome assembly
... hello i am working on new bacteriophage i isolated from a bacteria. so i extracted the DNA from bacteriophage after isolation of the later using cesium gradient. i checked the DNA on electrophoresis and i get a size of genome around 17 kb. i send the dna to company and sequenced the genome. i got t ...
bacteriophage genome de novo assembly written 13 months ago by najibveto30 • updated 13 months ago by Buffo1.5k
0
votes
1
answer
520
views
1
answers
Comment: C: extraction upstream sequence of precursor microrna
... thanks a lot for your help, however i didn't use bedtools before and also is it possible to blast and extract using bedtools? because the microrna are new in Atlantic salmon. ...
written 19 months ago by najibveto30
2
votes
1
answer
520
views
1
answer
extraction upstream sequence of precursor microrna
... hello i have several microrna with their mature sequences, it is from atlantic salmon and i need to get the precursor sequence for each microrna also i need the upstream sequence of 1000 not for each precursor to study possible binding sites for promoter studies. the atlantic salmon have a genome a ...
upstream precu microrna precursor written 19 months ago by najibveto30 • updated 19 months ago by shoujun.gu370
0
votes
18
answers
36k
views
18
answers
Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
... thanks a lot for this amazing book and i am enjoying reading the online version. i want to know if possible to add some chapter such as : - study of microrna-seq in model and non model organism. - study of RNA-seq in non model organism. ...
written 19 months ago by najibveto30
0
votes
2
answers
1.1k
views
2
answers
Comment: C: Someone has experience with KNIFE software for circRNA detection?
... thanks a lot for your help. ...
written 2.0 years ago by najibveto30
3
votes
2
answers
1.1k
views
5 follow
2
answers
Someone has experience with KNIFE software for circRNA detection?
... I am getting troubles to run KNIFE in my Linux box. Here is the command and the output of the system. Someone has experienced such kind of error?. Thanks in advance. COMMAND: ./completeRun.sh /home/fenguita/work/Nuno_FA_circRNAs/raw/ complete /home/fenguita/work/Nuno_FA_circRNAs/results/ outpu ...
knife circrna rna-seq written 2.0 years ago by najibveto30 • updated 8 months ago by jianxiangshi0
0
votes
1
answer
831
views
1
answers
Comment: C: remove dubplicate from ensemble seqeunce?
... i understand now. thanks for your explanation and sorry for my late reply. ...
written 2.1 years ago by najibveto30
0
votes
0
answers
611
views
0
answers
get the 3utr of gene using transcriptome and genome
... hello i am working on fish called fathead minnow and by looking in NCBI found the genome assembly and the transcriptome assembly pf this fish, plus the closed relative to it is the zebrafish. i have one gene of interest called the TP53i11, the zebrafish have it and i need to know the sequence of it ...
genome gene transciptome 3utr written 2.2 years ago by najibveto30 • updated 2.2 years ago by Biostar ♦♦ 20

Latest awards to najibveto

Popular Question 11 months ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file
Popular Question 11 months ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file
Popular Question 16 months ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file
Popular Question 16 months ago, created a question with more than 1,000 views. For Extract 3'utr from annotation file

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1999 users visited in the last hour