User: saj98

gravatar for saj98
saj98110
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4 years, 10 months ago
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s****@scarletmail.rutgers.edu

Posts by saj98

<prev • 108 results • page 1 of 11 • next >
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Comment: C: Tool perfect for data repository
... The data analysis was done by Genialis, Inc (Houston, TX). Shall I create a repo on GitHub as well. ...
written 25 days ago by saj98110
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Comment: C: Tool perfect for data repository
... I am referring to Rat germ cells RNAseq data. I will try NCBI. Thank you so much ...
written 25 days ago by saj98110
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Tool perfect for data repository
... Hello everyone I and my collogues got acceptance to publish our data in Endocrinology journal. They asked to create a data repository before final acceptance. Would be possible to guide me for a perfect tool for such purpose? I really appreciate your help Thanks ...
genome sequence rna-seq written 25 days ago by saj98110 • updated 12 hours ago by Biostar ♦♦ 20
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Volcano plot using R software
... I have run volcano plot using R software command `v<-csVolcanoMatrix(genes(cuff))`. the results show the sig genes in red color and non sig genes in black color. Then, when I run the command `v<-csVolcano(genes(cuff),"q6", "q2")`, it comes all black with no signal to the significant genes. Wou ...
R rna-seq written 14 months ago by saj98110 • updated 14 months ago by ATpoint40k
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Question regarding R software
... Hello Biostars team I would like to present my data in heatmap like the one in the attached picture [Published heatmap][1]. heatmap with breaks, high resolution and with subdivisions. Any tips or suggestions about R code to follow. Appreciate help [enter link description here][2] [1]: http ...
R rna-seq written 20 months ago by saj98110 • updated 20 months ago by Jean-Karim Heriche23k
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Comment: C: Bioinformatics question regarding multilevel pie chart
... Thank you so much, appreciate your help ...
written 20 months ago by saj98110
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Comment: C: Bioinformatics question regarding multilevel pie chart
... Thanks for answering. Yes I did. The published figure was presented as (sunburst chart). The sunburst chart can be created in office 365, which I do not have it. That is why I am looking for R code or any other tool serves similar purpose. ...
written 20 months ago by saj98110
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Bioinformatics question regarding multilevel pie chart
... Hello Biostars team I am interested to present my data like the attached figure. Does anyone know which tool I can use to organize my seq data like the attached figure? Thanks for your help ![enter image description here][1] [1]: http://science.sciencemag.org/content/sci/349/6254/1351/F2.la ...
R rna-seq written 20 months ago by saj98110
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CummeRbund (CS heatmap error message)
... Hello I am using cummeRbund package to analyse my data. When I use the following code h<-csHeatmap(mySigMat,cluster='both') I get the following error Error in (function (classes, fdef, mtable) : unable to find an inherited method for function 'csHeatmap' for signature '"gg"'. An ...
R written 22 months ago by saj98110 • updated 22 months ago by RamRS30k
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Comment: C: Bioinformatics workshop or training courses
... I bought one, thank you ...
written 2.2 years ago by saj98110

Latest awards to saj98

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Popular Question 2.2 years ago, created a question with more than 1,000 views. For Is There A Free Alternative To Ingenuity Pathway Analysis?
Popular Question 2.2 years ago, created a question with more than 1,000 views. For How can I detect lncRNA?
Popular Question 2.2 years ago, created a question with more than 1,000 views. For R software error
Popular Question 2.2 years ago, created a question with more than 1,000 views. For Tophat software installation

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