User: kartikayprasad

Reputation:
10
Status:
New User
Location:
India
Last seen:
1 week, 3 days ago
Joined:
4 years, 1 month ago
Email:
k*************@gmail.com

Posts by kartikayprasad

<prev • 20 results • page 1 of 2 • next >
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Comment: A: Sra file to bam file error
... Try shorting the headers of your sam file. Remove all the unnecessary info from the header and try again with samtools view -b -s input.sam > output.bam ...
written 13 days ago by kartikayprasad10
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Comment: A: Survial analysis with gene expression
... yes, but here he uses the geo id, what if i want to use the file which i have downloaded from the TCGA database? ...
written 3 months ago by kartikayprasad10
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Survial analysis with gene expression
... I have 200 genes and clinical data from tcga, i want to do the cox regression analysis and survival analysis using these genes. Can anyone help me regarding this. I am new in this type of analysis. ...
cox regression survial analysis rna-seq written 3 months ago by kartikayprasad10
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Comment: A: Survival analysis with gene expression
... Hey kelvin, this is a great tutorial. This is my first time for this kinda analysis, can you please tell how to use data obtained from TCGA both count and clinical data for this analysis. Thanks ...
written 3 months ago by kartikayprasad10
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Extracting similar ssrs from two different misa files
... Hello friends, I have two misa file, i want to extract those lines which are showing similar ssrs from both the files. for example: File1: ID SSR nr. SSR type SSR size start end P_S1_L001_R1_001_(paired)_150721_contig_1 1 p1 (T)11 11 905 915 P_S1_L001_R1_001_(paired)_150721_contig_1 2 p ...
perl python misa rna-seq ssrs written 19 months ago by kartikayprasad10 • updated 19 months ago by Biostar ♦♦ 20
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Comment: C: How to fetch those line having only similar characters.
... hey thanks for the code, can you please help me a little more. i was trying to add something in your code but it was a fail so can you please help. what i was trying that this code also print \n for those lines which is having similar nucleotides in it. for example: the code will also print \n for A ...
written 2.2 years ago by kartikayprasad10
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Comment: C: How to fetch those line having only similar characters.
... hey thanks for the code, can you please help me a little more. i was trying to add something in your code but it was a fail so can you please help. what i was trying that this code also print \n in those lines which ih having similar nucleotides in it. for example: the code will print \n for A,A an ...
written 2.2 years ago by kartikayprasad10
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Comment: C: How to fetch those line having only similar characters.
... Yes i will try all of the codes and i will surely upvote the answer. Thanks once again for the help. ...
written 2.2 years ago by kartikayprasad10
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Comment: C: How to fetch those line having only similar characters.
... thank you very much for the help ...
written 2.2 years ago by kartikayprasad10
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Comment: C: How to fetch those line having only similar characters.
... hi mxs, thanks for the reply. Can you please explain the code? Thanks ...
written 2.2 years ago by kartikayprasad10

Latest awards to kartikayprasad

Popular Question 18 months ago, created a question with more than 1,000 views. For how to design biological pathways
Popular Question 18 months ago, created a question with more than 1,000 views. For how to find splice variants using trinity
Popular Question 19 months ago, created a question with more than 1,000 views. For Calculation of genic and intergenic region
Popular Question 2.2 years ago, created a question with more than 1,000 views. For Calculation of genic and intergenic region

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