User: gemini.venkat

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Posts by gemini.venkat

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Answer: C: R:Cannot install snpStats packages
... With the latest update you have to do the same but install BiocManager : This is done only for version R > 3.4 if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install() and then : BiocManager::install(c("snpStats")) wo ...
written 4 months ago by gemini.venkat20 • updated 4 months ago by zx87549.1k
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Database listing genes involved in Breast and/or Prostate cancer
... Hi, I am currently curating a list of prognostic genes and gene variants responsible for prostate and/or breast cancer. I am currently concentrating only upon germline variants, but am also collecting the somatic variants as when I run into them. Is there a database which already has such a list of ...
gene genome genetics snp cancer written 7 months ago by gemini.venkat20 • updated 7 months ago by Denise - Open Targets5.1k
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Comment: C: Gene Expression data and variants from the same fastqc raw file
... Would this be different if I had the fastq files for DNA-seq?! ...
written 23 months ago by gemini.venkat20
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Comment: C: Gene Expression data and variants from the same fastqc raw file
... Sorry for not being clear, I meant the fastq files. ...
written 23 months ago by gemini.venkat20
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Gene Expression data and variants from the same fastq raw file
... I am a total beginner in gene expression studies and variant analysis studies, I was wondering if the same raw fastqc files can be used for both studies? Or are there different fastqc files for different studies. I am working on RNAdeepseq files. ...
fastq gene expression variant analysis fastqc written 23 months ago by gemini.venkat20 • updated 23 months ago by Michael Dondrup47k
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Comment: C: Whole Blood Gene Expression Deconvolution
... Hi Michael, Have you had any headway into this? I am working on CellMix Currently and would really need some help with this. Thanks,Venkat ...
written 4.1 years ago by gemini.venkat20

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