User: 1106518271

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110651827130
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Posts by 1106518271

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Comment: C: How can I get the ordered names or new matrix according to cluster result?
... I see, so kind of you, truly inspirational! ...
written 6 days ago by 110651827130
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Comment: C: How can I get the ordered names or new matrix according to cluster result?
... I seeked this command a long time, thanks! ...
written 6 days ago by 110651827130
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Comment: C: How can I get the ordered names or new matrix according to cluster result?
... I wonder can I get gene names or matirx sorted as: #like cluster dendrogram shows from Left to Right: Gene 31 Gene 45 Gene 26 Gene 3 Gene 25 Gene 33 ... Gene 50 Gene 46 Gene 35 Gene 36 ...
written 6 days ago by 110651827130
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Comment: C: How can I get the ordered names or new matrix according to cluster result?
... I see, very clear! Thanks! ...
written 7 days ago by 110651827130
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How can I get the ordered names or new matrix according to cluster result?
... To cluster matirxmy, for this to see which colnames can divided into groups. d <- dist(matirxmy, method = "euclidean") #dim(matixmy) 232, 121 hc <- hclust(d) **Also, it can be plot like the first figure**![enter image description here][1] **My question is for tree like figure sho ...
R next-gen written 7 days ago by 110651827130 • updated 7 days ago by Kevin Blighe24k
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Comment: C: how can I transfer this different steps bedgraph format into 1bp file?
... each of these two methods you mentioned runs successfully! awk -F "\t" -v OFS="\t" '$1 ~ /^chr2$/' test.txt awk '/chr2\t/' test.txt ...
written 8 days ago by 110651827130
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Comment: C: how can I transfer this different steps bedgraph format into 1bp file?
... For awk -F "\t" -v OFS="\t" '/chr2/ {while ($2 < $3) { print $1,$2,$4; ++$2 }}' test.txt if input test.txt file is chr1 0 2 0 chr1 2 6 1.5 chr2 0 3 0 chr2 3 10 2.1 chr2 11 13 1.5 still no output, just like enter and shows nothing ...
written 8 days ago by 110651827130
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Comment: C: how can I transfer this different steps bedgraph format into 1bp file?
... if did that, no output now ...
written 8 days ago by 110651827130
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Comment: C: how can I transfer this different steps bedgraph format into 1bp file?
... For this, I tried for my large file contains chr1-chr22 and chrX chrY, these commands will also output chr22 line, not just chr2 $ awk -F "\t" -v OFS="\t" '/chr2/' test.txt awk '/chr2/' ...
written 8 days ago by 110651827130
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Comment: C: how can I transfer this different steps bedgraph format into 1bp file?
... Thanks, seems well worth learning bedops! ...
written 8 days ago by 110651827130

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