User: Jessica L
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Posts by Jessica L
... I've also had issues with some of the GATK tools outputting what were basically empty vcf files. I found that running the base recalibrator before I ran haplotype caller changed my outputs significantly. I wonder if you're not running into something similar. ...
... I realize this is an old post but my current project is requiring me to pay closer attention to RNA fusion nomenclature so I've been running into the same problem as the OP (I actually came across this post while googling HGVS r. notation. Here's what I've been able to learn (corrections would be ap ...
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