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User: alessandrotestori7

gravatar for alessandrotestori7
Reputation:
380
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Last seen:
22 hours ago
Joined:
3 years, 9 months ago
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Posts by alessandrotestori7

<prev • 70 results • page 1 of 7 • next >
5
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Answer: C: GWAS - QC & Tutorials.
... One good protocol for QC is: PMID: 21085122 - Data quality control in genetic case-control association studies. ...
written 5 weeks ago by alessandrotestori7 • 380 • updated 22 days ago by zx8754 ♦ 8.8k
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Comment: C: Odds ratio confidence interval in meta-analysis
... Yes, they are. Plink v1.90b3.31 ...
written 10 months ago by alessandrotestori7 • 380
0
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1
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1
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Comment: C: install Bioconductor package and its dependencies
... Thanks a lot! This solved my problem! ...
written 20 months ago by alessandrotestori7 • 380
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1
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1.4k
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Comment: C: install Bioconductor package and its dependencies
... I am installing this package from R: biocLite("motifbreakR") It seems there is a problem with "libcurl": "Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable". Then configurations ...
written 20 months ago by alessandrotestori7 • 380 • updated 20 months ago by WouterDeCoster ♦ 42k
7
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5 follow
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install Bioconductor package and its dependencies
... Hi! I am trying to install package "motifbreakR" from Bioconductor, but it seems it has too many dependencies that are not available on my computer. Is there a way to install a Bioconductor package and all its dependencies at once? Thanks! ...
R bioconductor written 20 months ago by alessandrotestori7 • 380 • updated 20 months ago by h.mon ♦ 28k
2
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Comment: C: How to annotate repeats?
... Hi! Have you tried RepeatMasker? http://www.repeatmasker.org/ ...
written 20 months ago by alessandrotestori7 • 380
0
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0
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775
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Linkage Disequilibrium calculation
... Hi! I want to compute linkage disequilibrium r^2 value between two SNPs. One of them is only in hg38 genome assembly, but not in previous assembly versions. The most popular tools don't have information about this SNP and it is not possible to liftover its coordinates to previous genome assembly r ...
snps ld written 21 months ago by alessandrotestori7 • 380
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Comment: C: Internship in Genomics and Transcriptomics
... Would it be legitimate to ask where? ...
written 22 months ago by alessandrotestori7 • 380
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Comment: C: GWAS - approximate odds ratio and standard error
... Sure it helps! Thanks a lot! ...
written 22 months ago by alessandrotestori7 • 380
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Comment: C: Determine GO hierarchy in a list of GO terms
... Thanks! Is that a library in R? ...
written 23 months ago by alessandrotestori7 • 380

Latest awards to alessandrotestori7

Appreciated 22 days ago, created a post with more than 5 votes. For C: GWAS - QC & Tutorials.
Teacher 22 days ago, created an answer with at least 3 up-votes. For A: Question about ensembl script
Popular Question 4 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 6 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 6 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 9 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 9 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 16 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 16 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 19 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 22 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 22 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Scholar 23 months ago, created an answer that has been accepted. For A: Question about ensembl script
Popular Question 2.2 years ago, created a question with more than 1,000 views. For getting germline mutations
Supporter 2.9 years ago, voted at least 25 times.
Scholar 3.8 years ago, created an answer that has been accepted. For A: Question about ensembl script
Teacher 3.8 years ago, created an answer with at least 3 up-votes. For A: Question about ensembl script
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