User: alessandrotestori7

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Posts by alessandrotestori7

<prev • 68 results • page 1 of 7 • next >
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Comment: C: install Bioconductor package and its dependencies
... Thanks a lot! This solved my problem! ...
written 8 months ago by alessandrotestori7310
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Comment: C: install Bioconductor package and its dependencies
... I am installing this package from R: biocLite("motifbreakR") It seems there is a problem with "libcurl": "Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable". Then configurations ...
written 8 months ago by alessandrotestori7310 • updated 8 months ago by WouterDeCoster35k
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install Bioconductor package and its dependencies
... Hi! I am trying to install package "motifbreakR" from Bioconductor, but it seems it has too many dependencies that are not available on my computer. Is there a way to install a Bioconductor package and all its dependencies at once? Thanks! ...
R bioconductor written 8 months ago by alessandrotestori7310 • updated 8 months ago by h.mon21k
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Comment: C: How to annotate repeats?
... Hi! Have you tried RepeatMasker? http://www.repeatmasker.org/ ...
written 8 months ago by alessandrotestori7310
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Linkage Disequilibrium calculation
... Hi! I want to compute linkage disequilibrium r^2 value between two SNPs. One of them is only in hg38 genome assembly, but not in previous assembly versions. The most popular tools don't have information about this SNP and it is not possible to liftover its coordinates to previous genome assembly r ...
snps ld written 9 months ago by alessandrotestori7310
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Comment: C: Internship in Genomics and Transcriptomics
... Would it be legitimate to ask where? ...
written 10 months ago by alessandrotestori7310
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Comment: C: GWAS - approximate odds ratio and standard error
... Sure it helps! Thanks a lot! ...
written 10 months ago by alessandrotestori7310
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Comment: C: Determine GO hierarchy in a list of GO terms
... Thanks! Is that a library in R? ...
written 10 months ago by alessandrotestori7310
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Comment: C: Determine GO hierarchy in a list of GO terms
... Thanks for your suggestion! I have now changed the title ...
written 10 months ago by alessandrotestori7310
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Determine GO hierarchy in a list of GO terms
... Hi! I have a list of GO terms. I would like to know if in my list there are any child or ancestor terms of other GO terms in the list. Is there a tool to do this? Where can I alternatively download such a schema? Please let me know. Thanks, cheers. ...
gene ontology written 10 months ago by alessandrotestori7310 • updated 10 months ago by Alex Reynolds26k

Latest awards to alessandrotestori7

Popular Question 4 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 4 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 7 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 10 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 10 months ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Scholar 11 months ago, created an answer that has been accepted. For A: Question about ensembl script
Popular Question 14 months ago, created a question with more than 1,000 views. For getting germline mutations
Supporter 22 months ago, voted at least 25 times.
Scholar 2.8 years ago, created an answer that has been accepted. For A: Question about ensembl script
Teacher 2.8 years ago, created an answer with at least 3 up-votes. For A: Question about ensembl script

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