User: alessandrotestori7

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Posts by alessandrotestori7

<prev • 63 results • page 1 of 7 • next >
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Comment: C: Internship in Genomics and Transcriptomics
... Would it be legitimate to ask where? ...
written 16 days ago by alessandrotestori7270
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Comment: C: GWAS - approximate odds ratio and standard error
... Sure it helps! Thanks a lot! ...
written 4 weeks ago by alessandrotestori7270
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Comment: C: Determine GO hierarchy in a list of GO terms
... Thanks! Is that a library in R? ...
written 4 weeks ago by alessandrotestori7270
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Comment: C: Determine GO hierarchy in a list of GO terms
... Thanks for your suggestion! I have now changed the title ...
written 4 weeks ago by alessandrotestori7270
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Determine GO hierarchy in a list of GO terms
... Hi! I have a list of GO terms. I would like to know if in my list there are any child or ancestor terms of other GO terms in the list. Is there a tool to do this? Where can I alternatively download such a schema? Please let me know. Thanks, cheers. ...
gene ontology written 4 weeks ago by alessandrotestori7270 • updated 4 weeks ago by Alex Reynolds22k
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Comment: C: Gene set analysis
... Thanks; sounds reasonable! ...
written 5 weeks ago by alessandrotestori7270
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Comment: C: Gene set analysis
... I have edited my question as suggested; thanks for the comment ...
written 5 weeks ago by alessandrotestori7270
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Gene set analysis
... Hi! I have been very strict with my analyses and I have identified three short genomic regions (less than 1 Megabase) from several Genome Wide Association Studies. Very significant genes overlap with these regions, but few in number (around 30), even if I look 1 Megabase upstream and downstream. Ru ...
enrichment genes written 5 weeks ago by alessandrotestori7270 • updated 5 weeks ago by theobroma221.1k
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Loci identification through SNPs LD information
... Dear all, I want to define several loci in a genetic region through linkage disequilibrium information of SNPs. I have sorted all SNPs in ascending order according to their association p-values and then I have assigned to a locus all SNPs in linkage with the lead SNP (r^2 >= 0.5). The remaining S ...
gwas snp written 7 weeks ago by alessandrotestori7270 • updated 7 weeks ago by Kevin Blighe13k
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Odds ratio confidence interval in meta-analysis
... Hi! Does plink output confidence intervals of odds ratio in meta-analysis? I have already (unsuccessfully) tried: plink --meta-analysis study1.txt study2.txt --ci 0.95 Thanks. Cheers ...
gwas plink meta-analysis written 8 weeks ago by alessandrotestori7270

Latest awards to alessandrotestori7

Popular Question 6 days ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Popular Question 23 days ago, created a question with more than 1,000 views. For beta coefficient for METAL input
Scholar 8 weeks ago, created an answer that has been accepted. For A: Question about ensembl script
Popular Question 4 months ago, created a question with more than 1,000 views. For getting germline mutations
Supporter 12 months ago, voted at least 25 times.
Scholar 23 months ago, created an answer that has been accepted. For A: Question about ensembl script
Teacher 23 months ago, created an answer with at least 3 up-votes. For A: Question about ensembl script

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