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5
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1
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18k
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Answer: A: Bowtie2-output to file
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.6k
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Comment: C: Different FPKM values for same condition form cufflink
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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3.6k
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Comment: C: Should I get the mean of 2 log2 transformed RPKM values?
9.1 years ago by Satyajeet Khare ★ 1.6k
1
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0
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2.2k
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Comment: C: How identify all genes whose expression correlated with gene X from rpkm data se
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.4k
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GEO per sequence quality score
GEO
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.1k
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Comment: C: RNA Seq - Tophat GFF errror
9.1 years ago by Satyajeet Khare ★ 1.6k
3
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1
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3.1k
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Answer: A: Error while building index for ecoli referenc genome
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.1k
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Comment: C: X Chromsome Silencing
9.1 years ago by Satyajeet Khare ★ 1.6k
1
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1
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2.1k
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Answer: C: X Chromsome Silencing
9.1 years ago by Satyajeet Khare ★ 1.6k
3
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0
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12k
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Answer: C: What's the difference between EGA, ENA, GEO, SRA and ArrayExpress
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.5k
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Comment: C: Control data for chip-seq analysis of SRX681547, SRX681548 data
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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0
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4.7k
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Comment: C: I am trying to load a BAM file (Whole Genome) to IGV but I can't see anything
9.1 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.1k
views
Comment: C: Reverse order of Cuffdiff samples?
9.1 years ago by Satyajeet Khare ★ 1.6k
3
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1
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2.5k
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Answer: C: why we performed cufflinks and what does the assembled transcripts mean?
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.9k
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Comment: C: Drosophila differential expression.
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.7k
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Comment: C: Histone modifications data on embryonic stem cells to differentiated stages
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.3k
views
Comment: A: Analyzing RNA Seq splice variants using spike-ins?
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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1
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1.9k
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Answer: A: Drosophila differential expression.
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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3.4k
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Answer: A: how to calculaute Tissue Specificity of genes
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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1
reply
2.7k
views
Answer: A: Tool for Human Gene Functional classes in R
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
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3.1k
views
Answer: A: Why does cuffdiff test differential isoform expression for genes with only one a
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.9k
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Comment: C: Protein Prediction from cancer
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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0
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1.9k
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Answer: A: Protein Prediction from cancer
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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0
replies
2.7k
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Answer: A: Error when uploading Wig file to USCS
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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7.7k
views
Comment: C: Tophat2 "error running tophat_reports"
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
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3.9k
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Comment: C: How to get the longest transcript to represent this gene for the following ortho
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
reply
4.1k
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Comment: A: Tophat error! Warning: junction database is empty! Could anybody help?
9.2 years ago by Satyajeet Khare ★ 1.6k
6
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2
replies
2.3k
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Answer: A: Differentiall analysis of chip-deq data
9.2 years ago by Satyajeet Khare ★ 1.6k
2
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2
replies
2.6k
views
Answer: A: error in tophat2
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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1.6k
views
Answer: A: cummeRbund merge filtered data sets
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
replies
7.7k
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Comment: C: illumina quality trimming - FASTQC
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
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16k
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Comment: C: download from SRA
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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11k
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Comment: C: gffread is not working
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
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16k
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Answer: A: download from SRA
9.2 years ago by Satyajeet Khare ★ 1.6k
3
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0
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9.6k
views
Answer: A: I am really pissed off by the bioinformatics software world. Do/can we have a be
9.2 years ago by Satyajeet Khare ★ 1.6k
1
vote
0
replies
3.9k
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Comment: C: Need an advice on quality control of illumina reads
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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0
replies
3.9k
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Comment: A: Need an advice on quality control of illumina reads
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
replies
1.6k
views
Answer: A: Next Generation sequencing
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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0
replies
1.9k
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Answer: A: How to analyze Cufflinks data
9.2 years ago by Satyajeet Khare ★ 1.6k
2
votes
2
replies
2.8k
views
Answer: A: lncRNA gene vs. lncRNA isoform
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
reply
5.1k
views
Answer: A: CummeRbund problem when creating gene sets: Error in sqliteSendQuery: rsqlite_qu
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
replies
5.1k
views
Comment: C: CummeRbund problem when creating gene sets: Error in sqliteSendQuery: rsqlite_qu
9.2 years ago by Satyajeet Khare ★ 1.6k
1
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1
reply
3.6k
views
Comment: C: Binding sites of annotated chip-seq peak files
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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3.6k
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Comment: C: Binding sites of annotated chip-seq peak files
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
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2.0k
views
CrossMap issues changing genome version
RNA-Seq ChIP-Seq software error
updated 4.0 years ago by • 0 • written 9.2 years ago by ★ 1.6k
0
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0
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18k
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Comment: C: convert text file to fasta file
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
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2.5k
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Comment: C: Does Cuffmerge discard single-exon transcripts?
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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0
replies
2.6k
views
Comment: C: Cufflinks input- reference information
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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1
reply
2.6k
views
Comment: C: Cufflinks input- reference information
9.2 years ago by Satyajeet Khare ★ 1.6k
0
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2
replies
3.6k
views
Comment: C: RNASEQ GE analysis, p-values zero whereas fold changes are not??
9.2 years ago by Satyajeet Khare ★ 1.6k
283 results • Page 5 of 6
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