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Posts by andersdetermig
... You are using NGSadmix using 25 Million sites which seems like a very large number of SNPs - and you only have 9 individuals. Also it appears like you don't have a minimum minor allele frequency threshold. Given the very low number of individuals I would try a more stringent filter on SNPs for e ...
... try the -doPlink 2 option to generate plink input files (tped/tfam) http://popgen.dk/angsd/index.php/Plink ...
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