- New User
- Last seen:
- 6 months, 2 weeks ago
- 2 years, 5 months ago
Posts by andersdetermig
... You are using NGSadmix using 25 Million sites which seems like a very large number of SNPs - and you only have 9 individuals. Also it appears like you don't have a minimum minor allele frequency threshold. Given the very low number of individuals I would try a more stringent filter on SNPs for e ...
... try the -doPlink 2 option to generate plink input files (tped/tfam) http://popgen.dk/angsd/index.php/Plink ...
Latest awards to andersdetermig
Powered by Biostar version 2.3.0
Traffic: 1940 users visited in the last hour