User: Pranavathiyani G

Reputation:
240
Status:
Trusted
Location:
Pondicherry, India
Twitter:
pranavathiani
Last seen:
3 months ago
Joined:
3 years, 3 months ago
Email:
p*************@gmail.com

PhD Student at Centre for Bioinformatics, Pondicherry University.

Posts by Pranavathiyani G

<prev • 42 results • page 1 of 5 • next >
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Comment: C: Using unaligned reads as input for trinity
... Thanks. I'll have a look at it. ...
written 3 months ago by Pranavathiyani G240
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Comment: C: Using unaligned reads as input for trinity
... Thank you. I'll check that. ...
written 3 months ago by Pranavathiyani G240
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Comment: C: Using unaligned reads as input for trinity
... Because the result of HISAT mapping was low. ...
written 3 months ago by Pranavathiyani G240
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Using unaligned reads as input for trinity
... 'I have done HiSAT mapping for my RNAseq sample and I have got unaligned FASTQ sanger file. Can i use this unaligned files as input for running trinity or Should i use the original SRA reads file. ...
assembly rna-seq trinity written 3 months ago by Pranavathiyani G240
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Normalised counts of control samples in gene expression matrix
... I have 4 control and 4 treated samples of RNA seq data, for generating gene expression network should i consider adding the normalised counts of control samples in the gene expression matrix? ...
R network expression matrix rna-seq matrix written 12 months ago by Pranavathiyani G240 • updated 12 months ago by Devon Ryan91k
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Comment: C: How to identify strand of a gene in bacteria?
... If it's not available, is there any way to find it? ...
written 14 months ago by Pranavathiyani G240
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How to identify strand of a gene in bacteria?
... I have a list of genes (sequences) from bacteria and also have the whole genome sequence, how can i know the genes are encoded in positive strand or negative strand? Is there any possible way to find out? ...
bacteria database sequence tool strand written 14 months ago by Pranavathiyani G240 • updated 12 months ago by Biostar ♦♦ 20
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Comment: C: Trinotate error DBD::SQLite::db do failed: no such table:
... The command shows the resource doesn't exist now. From where I can download the Trinotate.sqlite.gz?? ...
written 16 months ago by Pranavathiyani G240
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Comment: C: How to visualize Proteome Networks
... Visualization of large scale networks depends on hardware components also? ...
written 19 months ago by Pranavathiyani G240
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Comment: C: How to visualize Proteome Networks
... I wish to analyze in context to disease & gene expression. ...
written 19 months ago by Pranavathiyani G240

Latest awards to Pranavathiyani G

Popular Question 4 months ago, created a question with more than 1,000 views. For How to install & run GenRev?
Epic Question 12 months ago, created a question with more than 10,000 views. For Ensembl ID to Gene Symbol
Popular Question 12 months ago, created a question with more than 1,000 views. For Gene Network Construction
Popular Question 12 months ago, created a question with more than 1,000 views. For Gene Mutation Frequency percentage
Popular Question 12 months ago, created a question with more than 1,000 views. For Finding all pathways for a gene.
Popular Question 12 months ago, created a question with more than 1,000 views. For What is Pathway Analysis?
Popular Question 12 months ago, created a question with more than 1,000 views. For How to start Gene Analysis?
Popular Question 12 months ago, created a question with more than 1,000 views. For How to define groups in GEO2R tool?
Student 12 months ago, asked a question with at least 3 up-votes. For How to define groups in GEO2R tool?
Popular Question 14 months ago, created a question with more than 1,000 views. For Trending research areas in Bioinformatics
Popular Question 16 months ago, created a question with more than 1,000 views. For Trending research areas in Bioinformatics
Popular Question 16 months ago, created a question with more than 1,000 views. For Gene Mutation Frequency percentage
Popular Question 16 months ago, created a question with more than 1,000 views. For Ensembl ID to Gene Symbol
Student 16 months ago, asked a question with at least 3 up-votes. For How to define groups in GEO2R tool?
Great Question 19 months ago, created a question with more than 5,000 views. For Ensembl ID to Gene Symbol
Popular Question 19 months ago, created a question with more than 1,000 views. For Trending research areas in Bioinformatics
Popular Question 19 months ago, created a question with more than 1,000 views. For Ensembl ID to Gene Symbol
Popular Question 2.3 years ago, created a question with more than 1,000 views. For Ensembl ID to Gene Symbol
Popular Question 2.3 years ago, created a question with more than 1,000 views. For Ensembl ID to Gene Symbol
Autobiographer 2.6 years ago, has more than 80 characters in the information field of the user's profile.

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