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Posts by xuchuan
... Dear all, I am using the abyss2.0 for genome assembly (kmer=93). The software terminates with errors like this: " `/home/genome/R2.trim.fastq': discarded 6014989 reads shorter than 93 bases `/home/genome/R2.trim.fastq': discarded 2650626 reads containing non-ACGT characters `/home/genome/R1.tri ...
... Hi everyone, I hava a question, when I set "-g 1" options in tophat2. Does it represent only report uniquely mapped reads or reported one alignment when multiple alignments are availbale for a read? Thank you very much ...
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