User: quentin.lamybesnier

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Posts by quentin.lamybesnier

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Comment: C: Which tools for the analysis of the evolution of bacterial genomes ?
... I have 1 fasta file for each year, and it is always the same bacterium. However it is possible that all the strains extracted are not clonal. It is really because of the contigs nature of my data that I can't align them. My problem is that regular annotation methods (I used prokka) produce a lot of ...
written 2.8 years ago by quentin.lamybesnier0
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Comment: C: Which tools for the analysis of the evolution of bacterial genomes ?
... Thank you for your answer. Unfortunately, my data is limited to contigs file, so I can't actually make any sort of alignment of the genomes. ...
written 2.8 years ago by quentin.lamybesnier0
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Which tools for the analysis of the evolution of bacterial genomes ?
... Hello everyone, I am currently working on the data of bacteria that have been moved from an environment to another, and then sequenced frequently. I am therefore looking at any tools that I could use to get data on the evolution of my functionnal genomes, as I am relatively inexperienced in bioinfo ...
genome analysis microbiology sequencing written 2.8 years ago by quentin.lamybesnier0 • updated 12 months ago by Biostar ♦♦ 20

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