User: alim.hcu

gravatar for alim.hcu
alim.hcu0
Reputation:
0
Status:
New User
Last seen:
9 months, 2 weeks ago
Joined:
2 years, 10 months ago
Email:
a*******@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by alim.hcu

<prev • 36 results • page 1 of 4 • next >
0
votes
0
answers
211
views
0
answers
Comment: C: binomial probability distribution, the one-tailed P value
... Formula link ...
written 10 months ago by alim.hcu0 • updated 10 months ago by genomax64k
0
votes
0
answers
211
views
0
answers
Comment: C: binomial probability distribution, the one-tailed P value
... https://ibb.co/cvinzS ...
written 10 months ago by alim.hcu0
0
votes
0
answers
211
views
0
answers
Page: (Closed) binomial probability distribution, the one-tailed P value
... ![enter image description here][1] [1]: https://image.ibb.co/eyABR7/Screenshot_from_2018_05_06_17_20_56.png I want to one-tailed P value by binomial probability distribution. I have two value of nCG and mCG. Lets assume nCG=10 and mCG=5. Any script in R? ...
page R written 10 months ago by alim.hcu0 • updated 10 months ago by RamRS20k
0
votes
1
answer
502
views
1
answers
Comment: A: LTR insertion time
... One recently published paper estimate the insertion time by "DNA divergence between the sequence was estimated with the baseml program from PAML ver. 4.8 (Yang 2007) using the Kimura-2-parameter base substitution model" Since i am new in bioinfo specially in evolution. So i am not able to understand ...
written 11 months ago by alim.hcu0
0
votes
1
answer
502
views
1
answers
Comment: C: LTR insertion time
... My Pipeline was 1) Pair wise alignment of LTR sequence using muscle 2) Now i have to determine Ks value for each pairwise alignment file. ...
written 11 months ago by alim.hcu0
0
votes
1
answer
502
views
1
answers
Comment: C: LTR insertion time
... I have already trie and getting error "LTR_pairwise_differences.py:44: SettingWithCopyWarning: A value is trying to be set on a copy of a slice from a DataFrame. Try using .loc[row_indexer,col_indexer] = value instead See the caveats in the documentation: http://pandas.pydata ...
written 11 months ago by alim.hcu0 • updated 11 months ago by genomax64k
0
votes
1
answer
502
views
5 follow
1
answer
LTR insertion time
... Dear User, Does anyone have some suggestion any script or any pipeline to calculate LTR insertion time. I think codeml or paml will not work here. I have already waste my so much time. please help me. Thank You ...
genome written 11 months ago by alim.hcu0
0
votes
2
answers
779
views
2
answers
Comment: C: make fasta sequence which is multiple of three
... Actually i am working on transposons. And i have to calculate insertion time for LTR pairs present in LTR elements. So basically these are the nucleotide sequences. ...
written 11 months ago by alim.hcu0
0
votes
2
answers
779
views
2
answers
Comment: C: make fasta sequence which is multiple of three
... I want to run this script in loop..Please suggest me to modify it for running in this script in loop.. Thank You ...
written 11 months ago by alim.hcu0
0
votes
2
answers
779
views
2
answers
Comment: C: make fasta sequence which is multiple of three
... Ok.. I got it..is there anything to do this in paml. I am aligning those sequences using maft. How should i trim those sequences. ...
written 11 months ago by alim.hcu0

Latest awards to alim.hcu

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1025 users visited in the last hour