Moderator: lakhujanivijay

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lakhujanivijay4.2k
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Bioinformatics 💻 Programmer | Linux ❤ Lover | Constant ☕ Learner

Me = ( ¼ Bioinformatician ) + ( ¼ Programmer ) +  ( ½ Biologist )

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Posts by lakhujanivijay

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Comment: C: error during updating by sudo apt
... Hello harry! We believe that this post does not fit the main topic of this site. Off topic post, not related to bioinformatics. Please post over at StackExchange for help. For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can h ...
written 4 days ago by lakhujanivijay4.2k • updated 4 days ago by ATpoint19k
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Comment: C: Data Science Course In Pune
... Hello successdig! We believe that this post does not fit the main topic of this site. Off topic post, not related to bioinformatics For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagree please tell ...
written 5 days ago by lakhujanivijay4.2k
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Comment: C: Is it possible to directly convert fastq to CRAM ?
... Hi https://www.biostars.org/u/8047/ Thanks for this comment. However, see this post where we have long discussions on fastq file format. https://www.biostars.org/p/259987/ http://omicsomics.blogspot.com/2012/12/the-trouble-with-fastq.html ...
written 5 days ago by lakhujanivijay4.2k
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Comment: C: First script trimmomatic
... Are you familiar with any programming language ? PERL , Python ? ...
written 6 days ago by lakhujanivijay4.2k
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Comment: C: Is it possible to directly convert fastq to CRAM ?
... Oh, thanks for that information. That was really helpful and important piece of information ...
written 7 days ago by lakhujanivijay4.2k
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Comment: C: Is it possible to directly convert fastq to CRAM ?
... Thanks for the suggestion ...
written 7 days ago by lakhujanivijay4.2k
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Is it possible to directly convert fastq to CRAM ?
... Hi, I am looking for efficient sequencing data storage solution. Based on this data, I believe that I could save a lot of space if I compress my fastq or bam files into CRAM (loseless). **SOURCE:** https://www.uppmax.uu.se/support/user-guides/using-cram-to-compress-bam-files/ While I can easil ...
fastq bam cram storage written 7 days ago by lakhujanivijay4.2k
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Answer: A: sed or awk command
... Hi https://www.biostars.org/u/56270/ Please use the formatting bar (especially the `code` option) to present your post better. I've done it for you this time. You could try `sed` like this sed 's/\.1//' ...
written 10 days ago by lakhujanivijay4.2k
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Comment: C: How Interpret the hisat2 output?
... Check this https://www.biostars.org/p/270812/ ...
written 11 days ago by lakhujanivijay4.2k
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Comment: C: Bioinformatics Training Program
... Hi https://www.biostars.org/u/56584/ This post does not qualify as a "JOB" post, hence, changed the tag. Perhaps you should add proper formatting ( "enter link description here") ...
written 12 days ago by lakhujanivijay4.2k

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