User: Vijay Lakhujani

gravatar for Vijay Lakhujani
Vijay Lakhujani1.3k
Reputation:
1,290
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Trusted
Location:
India
Twitter:
vijay_lakhujani
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Google Scholar Page
Last seen:
1 day, 3 hours ago
Joined:
1 year, 5 months ago
Email:
l*************@gmail.com

☛ I am a DBT Certified bioinformatician (BINC, Govt. Of India) with deep interest in Genomics and next generation sequencing technologies. I have enjoyed my industry experience of 6.5+ years working on design, implementation and analysis of microarray data and high-throughput NGS data.

☛ I love the idea of automation and my passion for programming has motivated me to learn some of the top-notch programming languages like PERL, Python, bash and R. I have developed several programs required to analyze, manipulate or automate key steps in sequencing data analysis. Programming is so much fun!

☛ I am an avid learner and I often try to engage myself in online courses because I strongly believe that in a quickly evolving domain like bioinformatics, the only way to keep up the pace with is to keep learning, both within and outside the job hours.

☛ I support the concept of “open-source” and try to share as much as knowledge regarding bioinformatics and its scope with students. I have been formally certified as “lecturer” (CSIR-NET-JRF+LS, Govt. of India) and involved in providing bioinformatics knowledge sharing sessions and cross functional trainings to technical teams and graduate students.

☛ You can connect with me via gmail, LinkedIn or over a call to discuss ideas or if you need any guidance. Here are my contact details.

✉  lakhujanivijay@gmail.com
✆  +91 966 22 55 385

▣ Linkedin: https://in.linkedin.com/in/lakhujanivijay

❝Everybody in this country should learn to program a computer, because it teaches you how to think❞
✍ Steve Jobs

 

Posts by Vijay Lakhujani

<prev • 279 results • page 1 of 28 • next >
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Comment: C: Differential Expressed Genes by FPKM expression matrix
... How many replicates do you have? ...
written 1 day ago by Vijay Lakhujani1.3k
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Answer: A: Statistics graduate wants to do some bioinformatics analysis
... By no means I want to de-motivate you with my comments here, however, please take it as a constructive feedback > I do understand something of DNA /RNA seqences and gene expressions > since I had bioinformatics courses during my degreee in statistics. well friend, this is not enough. People ...
written 1 day ago by Vijay Lakhujani1.3k
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Comment: C: FastQC after trimming adapters
... Please share the screen shots ...
written 1 day ago by Vijay Lakhujani1.3k
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Answer: A: R biomaRt snp_mart down?
... A related post could be found [here][1]. The question is different but the solutions might resolve your issue too. [1]: https://www.biostars.org/p/277839/ ...
written 1 day ago by Vijay Lakhujani1.3k
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Answer: A: Useful Bash Commands To Handle Fasta Files
... Bash one liner to get the A T (or U) G C counts for all the sequences in a multi fasta file ------------------------------------------------------------------ echo -e "seq_id\tA\tU\tG\tC"; while read line; do echo $line | grep ">" | sed 's/>//g'; for i in A U G C;do echo $line | grep -v ...
written 3 days ago by Vijay Lakhujani1.3k
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Comment: C: Error accessing ensembl biomart via BiomaRt R package
... > sessionInfo() R version 3.3.1 (2016-06-21) Platform: x86_64-redhat-linux-gnu (64-bit) Running under: CentOS release 6.6 (Final) locale: [1] LC_CTYPE=en_US.utf8 LC_NUMERIC=C [3] LC_TIME=en_US.utf8 LC_COLLATE=en_US.utf8 [5] LC_ ...
written 4 days ago by Vijay Lakhujani1.3k
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Error accessing ensembl biomart via BiomaRt R package
... ## Objective ## I have a list of ~58K ensembl gene ids of h.sapiens for which I need to extract the gene names, descriptions and other annotations from biomart. ---------- The online way is failing primarily because of the huge list I am uploading, hence, I though to give this a try with the Biom ...
R biomart written 4 days ago by Vijay Lakhujani1.3k • updated 4 days ago by Mike Smith300
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Answer: A: How come the QC-passed reads from samtools flagstat is different from FASTQ (R1+
... You can find the answer in [this][1] post [1]: https://www.biostars.org/p/193703/ ...
written 5 days ago by Vijay Lakhujani1.3k
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News: Symposium, Accelerating Biology 9-11, Jan, 2018 : Digitizing Life, Pune, India
... **Symposium** Accelerating Biology 2018: Digitizing Life **Organizing institute** C-DAC: Centre for Development of Advanced Computing, Pune,India **Symposium dates** 9-11, Jan, 2018 **Early Bird Registration End** Thursday, 9 November, 2017 **Venue** Indian Institute of Science Ed ...
bioinformatics symposium ngs news written 8 days ago by Vijay Lakhujani1.3k
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Comment: C: Scafolding and gap filling
... Can you please provide some information on the "extra/additional reads" ? ...
written 8 days ago by Vijay Lakhujani1.3k

Latest awards to Vijay Lakhujani

Teacher 10 days ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Scholar 11 days ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Scholar 5 weeks ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Scholar 9 weeks ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Scholar 3 months ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Scholar 3 months ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Guru 3 months ago, received more than 100 upvotes.
Scholar 3 months ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Scholar 3 months ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Teacher 4 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Scholar 5 months ago, created an answer that has been accepted. For A: How do i should proceed with 16S rRNA amplicon sequencing data from Illumina MiS
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Supporter 9 months ago, voted at least 25 times.
Commentator 9 months ago, created a comment with at least 3 up-votes. For C: how to extract particular regions of a sequence from fasta file if its range fo
Centurion 9 months ago, created 100 posts.
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Scholar 10 months ago, created an answer that has been accepted. For A: How do i should proceed with 16S rRNA amplicon sequencing data from Illumina MiS
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Scholar 12 months ago, created an answer that has been accepted. For A: How do i should proceed with 16S rRNA amplicon sequencing data from Illumina MiS
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Autobiographer 12 months ago, has more than 80 characters in the information field of the user's profile.
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features

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