Moderator: Vijay Lakhujani

gravatar for Vijay Lakhujani
Vijay Lakhujani3.5k
Reputation:
3,530
Status:
Trusted
Location:
India
Website:
https://lakhujanivijay...
Twitter:
vijay_lakhujani
Scholar ID:
Google Scholar Page
Last seen:
15 hours ago
Joined:
3 years, 1 month ago
Email:
l*************@gmail.com

Bioinformatician♦Programmer♦Learner


Howdy!

  • I am a bioinformatician with deep interest in Genomics, specially in next generation sequencing techniques (NGS). I enjoy programming and I usually code in Python, PERL, R and BASH. Programming is so much fun!
  • I also try to learn technical stuff with the help of MOOCs. I believe the best way to keep yourself updated is to keep learning. I also write sometimes on technical and non technical stuff. You can check out some of my articles on LinkedIn.
  • I love making new friends and discussing ideas. Do not hesitate to drop me an email if I could be of some help :)

Let's connect !

 

 

Posts by Vijay Lakhujani

<prev • 697 results • page 1 of 70 • next >
0
votes
1
answer
76
views
1
answers
Comment: C: Downloding only RNA-Seq Raw counts data from ICGC
... > I tried using dplyr but I am not able to get in the proper format. Share you code here ...
written 3 days ago by Vijay Lakhujani3.5k
1
vote
0
answers
198
views
0
answers
Comment: C: Duplicate/identical reads in fastq file
... So, what you are concerned about is identical headers + identical sequence or ANY ONE of these 2? ...
written 18 days ago by Vijay Lakhujani3.5k
1
vote
0
answers
198
views
0
answers
Comment: C: Duplicate/identical reads in fastq file
... How many are there , just check using [seqkit][1] zcat your_fastq_R1.fq.gz | seqkit rmdup -s -i -m -o clean.fa.gz -d duplicated.fa.gz -D duplicated.detail.txt Source : https://bioinf.shenwei.me/seqkit/usage/#duplicate [1]: https://bioinf.shenwei.me/seqkit/usage/#duplicate ...
written 18 days ago by Vijay Lakhujani3.5k
2
votes
4
answers
1.2k
views
4
answers
Comment: C: Misunderstood parameter of NCBI BLAST
... [Reply to the paper: Misunderstood parameters of NCBI BLAST impacts the correctness of bioinformatics workflows][1] [1]: https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/bty1026/5259186 ...
written 21 days ago by Vijay Lakhujani3.5k
0
votes
0
answers
77
views
0
answers
Comment: C: Sorting a matrix according to a factor
... Hello maryamtavasoli71! We believe that this post does not fit the main topic of this site. Pure R question. Not a bioinformatics question. For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagree plea ...
written 21 days ago by Vijay Lakhujani3.5k
0
votes
0
answers
200
views
0
answers
Comment: C: chatbot for genomics
... > Also, let me know the importance of machine learning in genomics. That should be a separate post! ...
written 22 days ago by Vijay Lakhujani3.5k
0
votes
0
answers
61
views
0
answers
Comment: C: A question about drop-seq and Nextera XT Library prepare
... Hello 610225668! We believe that this post does not fit the main topic of this site. Not a bioinformatics question. For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with. If you disagree please tell us why in a repl ...
written 22 days ago by Vijay Lakhujani3.5k
0
votes
0
answers
135
views
0
answers
Comment: C: merge data, R .excel
... Your question seems rather R instead of bioinformatics. It is likely someone will close your post for this reason. Additionally, you should let us know what have you tried so far. ...
written 22 days ago by Vijay Lakhujani3.5k
1
vote
3
answers
288
views
3
answers
Comment: C: MD into bioinformatics
... > You are the only one allowed by law to offer advice to patients by > acting on findings that we (as bioinformaticians) may come up with. I strongly agree with https://www.biostars.org/u/18713/ I see you as a clinician who can translate the bioinformatics analysis reports in clinical aspect ...
written 22 days ago by Vijay Lakhujani3.5k
0
votes
0
answers
125
views
0
answers
Comment: C: What is Genome-sequencing?
... If that's the case, then OP needs to re frame the question. ...
written 24 days ago by Vijay Lakhujani3.5k

Latest awards to Vijay Lakhujani

Popular Question 22 days ago, created a question with more than 1,000 views. For What are some good resources to learn shell script for NGS pipeline development?
Teacher 5 weeks ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Scholar 7 weeks ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Teacher 7 weeks ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Teacher 8 weeks ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Teacher 8 weeks ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Scholar 8 weeks ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Popular Question 9 weeks ago, created a question with more than 1,000 views. For What are some good resources to learn shell script for NGS pipeline development?
Scholar 9 weeks ago, created an answer that has been accepted. For A: Just complement or reverse sequence fom Biopython, but not reverse-complement on
Popular Question 10 weeks ago, created a question with more than 1,000 views. For What are some good resources to learn shell script for NGS pipeline development?
Popular Question 10 weeks ago, created a question with more than 1,000 views. For What are some good resources to learn shell script for NGS pipeline development?
Popular Question 10 weeks ago, created a question with more than 1,000 views. For How to install samtools v.1.2 on Ubuntu 14.0 32 bit?
Teacher 11 weeks ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Popular Question 11 weeks ago, created a question with more than 1,000 views. For How to install samtools v.1.2 on Ubuntu 14.0 32 bit?
Popular Question 3 months ago, created a question with more than 1,000 views. For Error encountered while running stattest from ballgown package
Commentator 4 months ago, created a comment with at least 3 up-votes. For C: how to extract particular regions of a sequence from fasta file if its range fo
Popular Question 4 months ago, created a question with more than 1,000 views. For Too low mapping percentage using HISAT2 on human reference genome.
Popular Question 5 months ago, created a question with more than 1,000 views. For Error encountered while running stattest from ballgown package
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Good Answer 5 months ago, created an answer that was upvoted at least 5 times. For C: bioinformatics phd .in distance education forum ...
Appreciated 5 months ago, created a post with more than 5 votes. For C: bioinformatics phd .in distance education forum ...
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Draw circular genome with selected features
Popular Question 6 months ago, created a question with more than 1,000 views. For Samtools flagstat number of reads do not match actual total number of reads.
Popular Question 6 months ago, created a question with more than 1,000 views. For Samtools flagstat number of reads do not match actual total number of reads.
Popular Question 6 months ago, created a question with more than 1,000 views. For Samtools flagstat number of reads do not match actual total number of reads.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1254 users visited in the last hour