User: nhaituan

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nhaituan0
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Posts by nhaituan

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Answer: A: Download all SRA of one species
... url = 'http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi' change to url = 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi' Than I can get it works ...
written 3 months ago by nhaituan0
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Download all SRA of one species
... I try to run the code below #!/usr/bin/python2.7 import json, urllib query = '"Vibrio cholerae O1"[Organism]"' params = {'db':'sra', 'term':query, 'usehistory':'y', 'retmode':'json',} url = 'http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi' stream = urllib.urlopen(url, urllib.urlencode ...
software error written 3 months ago by nhaituan0
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Comment: C: How To Remove The Same Sequences In The Fasta Files?
... Really helpful, thank you Brian Bushnell it solved my desire to get unique sequences in my set ...
written 16 months ago by nhaituan0

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