User: kamyasingh2490

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Posts by kamyasingh2490

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Correlate binding sites of two transcription factor from chip-seq data
... I have analyzed chip-seq raw data for two TFs oct4 and Nanog. i have a list of the enriched binding sites with their genomic coordinates and also using GREAT i have the gees that fall in these regions along with its TSS coordinates. Please suggest how do i correlate the binding sites of the two tran ...
oct4 association clustering chip-seq tss written 17 months ago by kamyasingh24900 • updated 17 months ago by tangming20052.2k
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mirdeep2 error in sequence file
... Hi, I am trying to identify miRNA from fastq file. I am using miRDeep2 for this purpose. As mentioned in the in the tutorial regarding the mature and precursor sequences of miRNA, I have downloaded it from miRBase version 21. While running the mirdeep2.pl command im getting this error in the report ...
ngs next-gen mirdeep2 written 17 months ago by kamyasingh24900 • updated 15 months ago by gzl20

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